Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/DATA/gebco30_M1.tif [1/1] : 0Using internal nodata values (e.g. 32767) for image /mnt/output/SSCS/DATA/gebco30_M1.tif. Copying nodata values from source /mnt/output/SSCS/DATA/gebco30_M1.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clipgebco.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 521P x 511L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clipgebco.tif [1/1] : 0Using internal nodata values (e.g. 32767) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clipgebco.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clipgebco.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clip_resamp.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 00:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid creating grid file /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd bboxfile= /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/bbox.txt False trying with nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc Getting info on /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc -51.129999999999995 -16.24000000000001 2.0 36.21 -51.0 -16.266666666666666 2.0666666666666664 36.13333333333333 gdalwarp -of GTiff -te -51.0 36.13333333333333 -16.266666666666666 2.0666666666666664 /mnt/output/SSCS/DATA/gebco30_M1.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clipgebco.tif gdalwarp -of GTiff -tr 0.06666666666666667 0.06666666666666667 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clipgebco.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clip_resamp.tif geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) DSAA 521 511 -50.96666666666667 -16.300000000000004 2.0999999999999943 36.099999999999994 -2237 7277 -30 rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clipgebco.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry_clip_resamp.tif bathymetry file created:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] 504 2 -50.883333 2.5 11733|Amapa| |Brazil|Minerva|6|-1|2 502 2 -50.844639 2.671602 11734|Amapa| |Brazil|Euca|5|-1|8 503 3 -50.83017 2.597187 11735|Amapa| |Brazil|Agua Doce|5|-1|5 506 4 -50.758121 2.431894 11737|Amapa| |Brazil|Maye|5|-1|2 508 4 -50.737869 2.26471 11738|Amapa| |Brazil|Bela Vista|5|-1|2 508 4 -50.736801 2.298818 11739|Amapa| |Brazil|Almeriana|5|-1|2 287 388 -25.15 16.966667 12738| | |Cape Verde|Pedrinha|6|-1|140 290 389 -25.08283 16.83143 12744| |Santa Luzia|Cape Verde|Sao Pedro|5|-1|110 287 389 -25.069061 17.023006 12745| | |Cape Verde|Vila do Porto Novo|6|-1|170 287 389 -25.06657 17.023781 12747| | |Cape Verde|Porto Novo|5|5471|170 290 391 -24.937929 16.825859 12754| |Santa Luzia|Cape Verde|Madeiral|5|-1|228 289 392 -24.880581 16.84704 12755| |Santa Luzia|Cape Verde|Calhau|5|-1|16 291 394 -24.75 16.75 12756| | |Cape Verde|Ponta da Cruz|6|-1|19 319 395 -24.697245 14.873103 12765| |Brava|Cape Verde|Santa Barbara|6|-1|1058 319 395 -24.69697 14.852676 12766| |Brava|Cape Verde|Garca|6|-1|1058 319 395 -24.692675 14.884523 12767| |Brava|Cape Verde|Furna|6|-1|1058 319 397 -24.50465 14.897 12768| |Fogo|Cape Verde|Sao Filipe|5|8093|296 320 399 -24.366667 14.833333 12787| |Fogo|Cape Verde|Fonte Aleixo|6|-1|1093 316 400 -24.362301 15.03867 12790| |Fogo|Cape Verde|Fajazinha|5|-1|629 294 400 -24.359871 16.56477 12791| | |Cape Verde|Tarrafal|5|-1|2 319 400 -24.339497 14.843421 12796| |Fogo|Cape Verde|Monte Vermelho|6|-1|617 319 400 -24.338375 14.857498 12798| |Fogo|Cape Verde|Dacabalaio|6|-1|617 319 400 -24.321787 14.888324 12802| |Fogo|Cape Verde|Mae Joana|6|-1|617 319 400 -24.319788 14.865679 12805| |Fogo|Cape Verde|Figueira Pavao|6|-1|617 319 400 -24.30471 14.88649 12811| |Fogo|Cape Verde|Cova Figueira|5|-1|617 293 401 -24.289221 16.56695 12813| | |Cape Verde|Preguica|5|-1|409 293 401 -24.265465 16.594366 12814| | |Cape Verde|Cruz de Baixo|6|-1|409 293 402 -24.216667 16.633333 12815| | |Cape Verde|Figueira de Coxe|6|-1|130 293 402 -24.202801 16.617485 12816| | |Cape Verde|Casinhas|6|-1|130 292 402 -24.198923 16.634264 12817| | |Cape Verde|Morre Braz|6|-1|126 293 402 -24.189114 16.609238 12818| | |Cape Verde|Morro Alto|6|-1|130 294 404 -24.092831 16.559 12824| | |Cape Verde|Carrical|5|-1|1576 313 410 -23.7 15.25 12856| |Santiago|Cape Verde|Biscainhos|6|-1|20 318 410 -23.672651 14.936956 12863| |Santiago|Cape Verde|Gouveia|6|-1|302 318 410 -23.67198 14.93921 12864| |Santiago|Cape Verde|Porto Gouveia|5|-1|302 314 411 -23.630354 15.199258 12875| |Santiago|Cape Verde|Ilheu|6|-1|93 314 411 -23.630007 15.177004 12876| |Santiago|Cape Verde|Covoada|6|-1|93 314 411 -23.608219 15.18799 12881| |Santiago|Cape Verde|Calheta|5|-1|93 318 412 -23.525019 14.903707 12902| |Santiago|Cape Verde|Santa Antonio|6|-1|15 318 412 -23.52389 14.947105 12903| |Santiago|Cape Verde|Montagarro|6|-1|15 318 412 -23.521726 14.932514 12904| |Santiago|Cape Verde|Vila Nova|6|-1|15 318 412 -23.521191 14.92331 12905| |Santiago|Cape Verde|Praia|1|113253|15 318 412 -23.517204 14.922791 12907| |Santiago|Cape Verde|Fazenda|6|-1|15 317 413 -23.498413 14.976566 12914| |Santiago|Cape Verde|Ponta Sao Francisco|6|-1|170 317 413 -23.495958 15.02532 12915| |Santiago|Cape Verde|Portal|6|-1|170 318 413 -23.488312 14.948876 12916| |Santiago|Cape Verde|Sao Tome|6|-1|1241 317 413 -23.487747 15.030573 12917| |Santiago|Cape Verde|Cancelo|6|-1|170 316 413 -23.48707 15.058315 12918| |Santiago|Cape Verde|Praia Baixo|6|-1|2 316 413 -23.477846 15.043778 12919| |Santiago|Cape Verde|Achada Baleia|6|-1|2 317 413 -23.466667 15.016667 12921| |Santiago|Cape Verde|Moia Moia|6|-1|170 317 413 -23.453304 15.000584 12924| |Santiago|Cape Verde|Porto Lobo|6|-1|170 315 417 -23.222408 15.134075 12938| |Maio|Cape Verde|Vila do Maio (Porto Inglez)|6|-1|2 315 417 -23.22175 15.13626 12939| |Maio|Cape Verde|Maio|5|-1|2 315 417 -23.17557 15.13293 12944| |Maio|Cape Verde|Barreiro|5|-1|2 315 418 -23.16325 15.16336 12946| |Maio|Cape Verde|Figueira da Horta|5|-1|679 293 421 -22.90818 16.60005 12967| |Sal|Cape Verde|Santa Maria|5|16960|254 293 421 -22.908052 16.599995 12968| |Sal|Cape Verde|Vila Santa Maria|6|-1|254 291 422 -22.893761 16.765949 12972| |Sal|Cape Verde|Pedra Lume|5|-1|380 302 423 -22.805428 16.008739 12981| |Boa Vista|Cape Verde|Prazeres|6|-1|25 302 423 -22.79583 15.99267 12984| |Boa Vista|Cape Verde|Curral Velho|5|-1|25 302 424 -22.746149 16.025339 12988| |Boa Vista|Cape Verde|Joao Barrosa|5|-1|54 299 424 -22.72028 16.19556 12993| |Boa Vista|Cape Verde|Gata|5|-1|2 127 495 -17.980431 27.69441 13146|Canarias (Canary Islands)|Hierro|Spain|Tabique|5|-1|499 125 496 -17.961649 27.815539 13148|Canarias (Canary Islands)|Hierro|Spain|Mocanal|5|-1|321 126 496 -17.957451 27.748261 13149|Canarias (Canary Islands)|Hierro|Spain|Isora|5|-1|1354 125 496 -17.91556 27.80287 13154|Canarias (Canary Islands)|Hierro|Spain|Valverde|4|-1|321 125 496 -17.903419 27.785768 13157|Canarias (Canary Islands)|Hierro|Spain|Puerto de la Estaca|5|-1|321 115 497 -17.845619 28.484449 13162|Canarias (Canary Islands)|Isla de la Palma|Spain|Fuencaliente|5|-1|480 114 498 -17.820566 28.509577 13163|Canarias (Canary Islands)|Isla de la Palma|Spain|Las Caletas|5|-1|735 113 499 -17.76391 28.60257 13170|Canarias (Canary Islands)|Isla de la Palma|Spain|Mazo|4|-1|1116 111 499 -17.747101 28.73086 13171|Canarias (Canary Islands)|Isla de la Palma|Spain|Puntallana|4|2351|1021 322 503 -17.45192 14.68668 13172| | |Senegal|Dakar|1|2341588|31 321 504 -17.394461 14.75394 13174| | |Senegal|Dagoudane|5|-1|32 321 505 -17.325817 14.729852 13179| | |Senegal|Mbao|6|-1|87 121 505 -17.31686 28.083 13180|Canarias (Canary Islands)|Isla de la Gomera|Spain|Vueltas|5|-1|2 321 505 -17.308147 14.75543 13182| | |Senegal|Kammba|6|-1|87 51 507 -17.21114371 32.73620135 13192| | |Portugal|Jardim do Mar|1| |2 122 507 -17.185869 28.024969 13195|Canarias (Canary Islands)|Isla de la Gomera|Spain|Playa de Santiago|5|-1|1198 323 507 -17.166815 14.633245 13200| | |Senegal|Nditarh|6|-1|10 49 508 -17.16582237 32.866193 13201| | |Portugal|Porto Moniz|1| |211 324 508 -17.11508 14.556677 13208| | |Senegal|Popenguine|6|-1|3 121 508 -17.11371 28.08959 13209|Canarias (Canary Islands)|Isla de la Gomera|Spain|San Sebastian de la Gomera|4|-1|762 324 508 -17.10767 14.56049 13210| | |Senegal|Pobenguem|5|-1|3 52 509 -17.09387843 32.6803172 13212| | |Portugal|Ponta do Sol|1| |89 229 509 -17.090441 20.83942 13213|Oued Ed Dahab| |Western Sahara|La Aguera|5|-1|5 325 509 -17.083333 14.483333 13214| | |Senegal|Somone|6|-1|3 325 509 -17.060047 14.464618 13217| | |Senegal|Ngaparou|6|-1|3 228 509 -17.04969 20.91728 13219|Dakhlet Nouadhibou| |Mauritania|Port-Etienne|4|-1|4 325 509 -17.036779 14.474844 13221| | |Senegal|Ngaring|6|-1|3 229 510 -17.033333 20.85 13223|Dakhlet Nouadhibou| |Mauritania|Cansado|6|-1|11 52 510 -16.97527074 32.64790068 13228| | |Portugal|Camara de Lobos|1| |19 328 511 -16.916922 14.28616 13236| | |Senegal|Ponto|6|-1|2 52 511 -16.90865673 32.64598837 13239| | |Portugal|Funchal|1| |84 50 513 -16.82756643 32.7728789 13250| | |Portugal|Porto da Cruz|1| |71 333 513 -16.77076 13.92921 13262| | |Senegal|Djifere|5|-1|4 346 513 -16.76852 13.09299 13263| | |The Gambia|Kartung|5|-1|2 51 514 -16.76460196 32.71637849 13273| | |Portugal|Machico|1| |737 353 514 -16.762899 12.631188 13277| | |Senegal|Efok Etouta|6|-1|7 353 514 -16.759806 12.591352 13278| | |Senegal|Boulalo|6|-1|7 353 514 -16.754502 12.622766 13283| | |Senegal|Boulana|6|-1|7 353 514 -16.754293 12.587562 13284| | |Senegal|Atadialama|6|-1|7 353 514 -16.750669 12.57488 13287| | |Senegal|Diogue|5|-1|7 353 514 -16.749657 12.582575 13290| | |Senegal|Essanholou|6|-1|7 353 514 -16.743378 12.624857 13295| | |Senegal|Bourassik|6|-1|7 353 514 -16.737196 12.586971 13298| | |Senegal|Sidiounfour|6|-1|7 51 514 -16.73182652 32.73720871 13303| | |Portugal|Canical|1| |737 353 514 -16.730467 12.621021 13305| | |Senegal|Kanho|6|-1|7 353 514 -16.729929 12.582791 13306| | |Senegal|Dimassane|6|-1|7 357 514 -16.716631 12.35053 13315| | |Senegal|Kabrousse|5|-1|7 357 514 -16.705717 12.362347 13321| | |Senegal|Nialon|6|-1|7 352 515 -16.664074 12.634538 13333| | |Senegal|Kabounkoute|6|-1|18 357 515 -16.650419 12.349727 13336| | |Guinea-Bissau|Sueujaque|6|-1|2 357 515 -16.65 12.35 13337|Cacheu| |Guinea-Bissau|Sucujaque|6|-1|2 334 516 -16.633333 13.866667 13344| | |Senegal|Niamare|6|-1|2 341 516 -16.6 13.366667 13361|Western| |The Gambia|Mandinari|6|-1|2 358 516 -16.594543 12.286254 13363| | |Guinea-Bissau|Varela|6|-1|6 340 516 -16.588465 13.449549 13365|Banjul| |The Gambia|Banjul|1|33913|13 334 516 -16.578413 13.869865 13369| | |Senegal|Bakalou|6|-1|2 340 517 -16.545011 13.485955 13383| | |The Gambia|Barra|6|5309|5 121 517 -16.535905 28.044271 13390|Canarias (Canary Islands)|Tenerife|Spain|El Medano|5|-1|275 340 517 -16.53026 13.47844 13397| | |The Gambia|Essau|5|5860|5 340 517 -16.523087 13.493181 13402| | |The Gambia|Myamba|6|-1|5 353 518 -16.483333 12.583333 13421| | |Senegal|Bandial|6|-1|2 342 518 -16.46781 13.35999 13427|North Bank| |The Gambia|Tuba Kolong|5|-1|8 359 518 -16.466667 12.233333 13428|Cacheu| |Guinea-Bissau|Igim|6|-1|2 372 518 -16.45 11.3 13433| | |Guinea-Bissau|Anaburu|6|-1|3 373 518 -16.44895 11.297322 13436| | |Guinea-Bissau|Egara|6|-1|8 342 518 -16.436951 13.351385 13437| | |The Gambia|Lamin|6|-1|8 359 518 -16.434614 12.202402 13438| | |Guinea-Bissau|Jufunco|6|-1|2 119 519 -16.432246 28.232631 13439|Canarias (Canary Islands)|Tenerife|Spain|Fasnia|5|2772|855 359 519 -16.417475 12.20962 13443| | |Guinea-Bissau|Ossor|6|-1|4 342 519 -16.415407 13.3422 13445| | |The Gambia|Bantang Killing|6|-1|9 359 519 -16.403827 12.199859 13449| | |Guinea-Bissau|Bolor|6|-1|4 342 519 -16.4 13.333333 13450|North Bank| |The Gambia|Baria|6|-1|9 359 519 -16.397878 12.199383 13452|Cacheu| |Guinea-Bissau|Bolola|6|-1|4 373 519 -16.39295 11.289639 13453| | |Guinea-Bissau|Equisar|6|-1|7 342 519 -16.384943 13.335206 13455| | |The Gambia|Albreda|6|-1|9 118 519 -16.382999 28.298716 13456|Canarias (Canary Islands)|Tenerife|Spain|Samarines|3|-1|295 gauges file created:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/gauges.dat 2022-10-04 18:00:00 2022-10-05 00:00:00 2.0 2022-10-04 18:00:00 ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 writeFolder=2022/GDACS/1000931/1_HWRF restart=False ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/case.dance 2022-10-05 07:01:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:01:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:01:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:01:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:01:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:01:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:02:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:02:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:02:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:02:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:02:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:02:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:03:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:03:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:03:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:03:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:03:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:03:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:04:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:04:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:04:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:04:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 2022-10-05 07:04:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221004.18, forecast of 04-10-2022 18:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/P1_MAXHEIGHT_END.jpg Input file size is 1745, 1711 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/locations.xml 2022-10-05 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/V_6.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/20221004.18.run_1.2.nc rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/20221004.18.run_1.2.nc cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/case.dance 2022-10-05 07:05:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:05:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:05:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:05:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:06:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:06:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:06:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:06:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:06:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:06:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:07:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:07:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:07:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:07:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:07:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:07:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:08:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:08:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:08:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:08:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:08:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:08:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 2022-10-05 07:09:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221005.00, forecast of 05-10-2022 00:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/locations.xml creating final O:\SSCS/2022/GDACS/1000931/1_HWRF/namidance ndt: 2 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/ 0 2 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 2.0999999999999943 25 (25, 511, 521) (25, 511, 521) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/ 1 2 True (1) numToAdd 289 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc 2.0999999999999943 1 (1, 511, 521) (1, 511, 521) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/final, forecast of 05-10-2022 00:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 313 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00000.jpg t=04-10-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00050.jpg t=05-10-2022 06:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00100.jpg t=05-10-2022 19:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00150.jpg t=06-10-2022 07:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00200.jpg t=06-10-2022 20:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00250.jpg t=07-10-2022 08:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00300.jpg t=07-10-2022 21:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF 2022-10-04 18:00:00 2022-10-05 00:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.00.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc 2.0 1 (1711, 1745) (1, 1711, 1745) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.14000286697247 1.9866695906432739 -16.231669533639142 36.22000292397661 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.0 2.066666666666677 -16.26666666666668 36.133333333333326 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact -51.0 -16.266666666666666 2.066666666666663 36.133333333333326 0.06666666666666667 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif False ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 00:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt True 1.1891666666666667 at least 1 case already under execution, exiting end check queue Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1745, 1711 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 06:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-05 06:00:00 3.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/case.dance 2022-10-05 15:03:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:03:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:03:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:03:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:04:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:04:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:04:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:04:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:04:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:04:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:05:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:05:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:05:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:05:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:05:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:05:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:06:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:06:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:06:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:06:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:06:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:06:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:07:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:07:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:07:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:07:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:07:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:07:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:08:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:08:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:08:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:08:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:08:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:08:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:09:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:09:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:09:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:09:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:09:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 2022-10-05 15:09:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221005.06, forecast of 05-10-2022 06:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/locations.xml creating final O:\SSCS/2022/GDACS/1000931/1_HWRF/namidance ndt: 3 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/ 0 3 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 2.0999999999999943 25 (25, 511, 521) (25, 511, 521) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/ 1 3 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/ 2 3 True (1) numToAdd 289 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc 2.0999999999999943 1 (1, 511, 521) (1, 511, 521) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/final, forecast of 05-10-2022 06:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 337 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00000.jpg t=04-10-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00050.jpg t=05-10-2022 06:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00100.jpg t=05-10-2022 19:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00150.jpg t=06-10-2022 07:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00200.jpg t=06-10-2022 20:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00250.jpg t=07-10-2022 08:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00300.jpg t=07-10-2022 21:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 3 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF 2022-10-04 18:00:00 2022-10-05 06:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.06.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc 2.0 1 (1711, 1745) (1, 1711, 1745) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.14000286697247 1.9866695906432739 -16.231669533639142 36.22000292397661 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.0 2.066666666666677 -16.26666666666668 36.133333333333326 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact -51.0 -16.266666666666666 2.066666666666663 36.133333333333326 0.06666666666666667 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 06:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000927/2_ECMWF/namidance/final/completed.txt False 0.26722222222222225 at least 1 case already under execution, exiting end check queue machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 06:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-05 06:00:00 3.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 06:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000923/1_ECMWF/namidance/final/completed.txt False 0.0008333333333333334 at least 1 case already under execution, exiting end check queue machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 06:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-05 06:00:00 3.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 06:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000923/1_ECMWF/namidance/final/completed.txt False 0.0008333333333333334 at least 1 case already under execution, exiting end check queue Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1745, 1711 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 12:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-05 12:00:00 4.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 2022-10-05 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/case.dance 2022-10-05 21:01:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:01:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:01:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:01:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:01:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:01:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:02:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:02:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:02:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:02:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:02:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:02:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:03:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:03:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:03:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:03:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:03:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:03:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:04:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:04:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:04:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:04:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:04:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:04:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 2022-10-05 21:05:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221005.12, forecast of 05-10-2022 12:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/locations.xml creating final O:\SSCS/2022/GDACS/1000931/1_HWRF/namidance ndt: 4 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/ 0 4 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 2.0999999999999943 25 (25, 511, 521) (25, 511, 521) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/ 1 4 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/ 2 4 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/ 3 4 True (1) numToAdd 289 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc 2.0999999999999943 1 (1, 511, 521) (1, 511, 521) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/final, forecast of 05-10-2022 12:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 361 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00000.jpg t=04-10-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00050.jpg t=05-10-2022 06:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00100.jpg t=05-10-2022 19:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00150.jpg t=06-10-2022 07:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00200.jpg t=06-10-2022 20:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00250.jpg t=07-10-2022 08:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00300.jpg t=07-10-2022 21:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00350.jpg t=08-10-2022 09:30 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 4 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF 2022-10-04 18:00:00 2022-10-05 12:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.12.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc 2.0 1 (1711, 1745) (1, 1711, 1745) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.14000286697247 1.9866695906432739 -16.231669533639142 36.22000292397661 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.0 2.066666666666677 -16.26666666666668 36.133333333333326 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact -51.0 -16.266666666666666 2.066666666666663 36.133333333333326 0.06666666666666667 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 12:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000927/2_ECMWF/namidance/final/completed.txt False 0.17777777777777778 at least 1 case already under execution, exiting end check queue machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 12:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-05 12:00:00 4.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 2022-10-05 12:00:00 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 12:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000923/1_ECMWF/namidance/final/completed.txt False 0.01611111111111111 at least 1 case already under execution, exiting end check queue Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1745, 1711 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 18:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-05 18:00:00 5.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 2022-10-05 12:00:00 2022-10-05 18:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/case.dance 2022-10-06 01:01:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:01:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:01:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:01:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:01:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:01:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:02:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:02:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:02:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:02:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:02:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:02:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:03:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:03:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:03:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:03:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:03:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:03:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:04:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:04:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:04:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:04:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:04:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:04:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:05:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:05:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:05:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:05:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:05:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:05:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:06:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:06:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:06:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:06:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:06:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:07:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:07:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:07:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 2022-10-06 01:07:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221005.18, forecast of 05-10-2022 18:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/locations.xml creating final O:\SSCS/2022/GDACS/1000931/1_HWRF/namidance ndt: 5 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/ 0 5 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 2.0999999999999943 25 (25, 511, 521) (25, 511, 521) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/ 1 5 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/ 2 5 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/ 3 5 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/ 4 5 True (1) numToAdd 289 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc 2.0999999999999943 1 (1, 511, 521) (1, 511, 521) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/final, forecast of 05-10-2022 18:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 385 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00000.jpg t=04-10-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00050.jpg t=05-10-2022 06:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00100.jpg t=05-10-2022 19:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00150.jpg t=06-10-2022 07:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00200.jpg t=06-10-2022 20:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00250.jpg t=07-10-2022 08:30 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00300.jpg t=07-10-2022 21:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00350.jpg t=08-10-2022 09:30 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 5 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF 2022-10-04 18:00:00 2022-10-05 18:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.18.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc 2.0 1 (1711, 1745) (1, 1711, 1745) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.14000286697247 1.9866695906432739 -16.231669533639142 36.22000292397661 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.0 2.066666666666677 -16.26666666666668 36.133333333333326 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact -51.0 -16.266666666666666 2.066666666666663 36.133333333333326 0.06666666666666667 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-05 18:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-05 18:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000929/1_ECMWF/namidance/final/completed.txt False 0.22138888888888889 at least 1 case already under execution, exiting end check queue Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1745, 1711 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-06 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-06 06:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-06 06:00:00 7.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 2022-10-05 12:00:00 2022-10-05 18:00:00 2022-10-06 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/case.dance 2022-10-06 13:02:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:02:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:02:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:02:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:02:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:02:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:03:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:03:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:03:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:03:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:03:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:03:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:04:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:04:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:04:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:04:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:04:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:04:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:05:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:05:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:05:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:05:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:05:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:05:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:06:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:06:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:06:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:06:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:06:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:06:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:07:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 2022-10-06 13:07:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221006.00, forecast of 06-10-2022 00:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/locations.xml 2022-10-06 06:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/V_6.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/20221006.00.run_1.2.nc rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/20221006.00.run_1.2.nc cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/case.dance 2022-10-06 13:08:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:08:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:08:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:08:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:08:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:08:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:09:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:09:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:09:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:09:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:09:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:09:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:10:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:10:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:10:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:10:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:10:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:10:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:11:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:11:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:11:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:11:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:11:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:11:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 2022-10-06 13:12:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221006.06, forecast of 06-10-2022 06:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/locations.xml creating final O:\SSCS/2022/GDACS/1000931/1_HWRF/namidance ndt: 7 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/ 0 7 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 2.0999999999999943 25 (25, 511, 521) (25, 511, 521) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/ 1 7 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/ 2 7 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/ 3 7 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/ 4 7 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/ 5 7 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/ 6 7 True (1) numToAdd 289 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc 2.0999999999999943 1 (1, 511, 521) (1, 511, 521) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/final, forecast of 06-10-2022 06:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 433 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00000.jpg t=04-10-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00100.jpg t=05-10-2022 19:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00200.jpg t=06-10-2022 20:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00300.jpg t=07-10-2022 21:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00400.jpg t=08-10-2022 22:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 7 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF 2022-10-04 18:00:00 2022-10-06 06:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.06.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc 2.0 1 (1711, 1745) (1, 1711, 1745) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.14000286697247 1.9866695906432739 -16.231669533639142 36.22000292397661 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.0 2.066666666666677 -16.26666666666668 36.133333333333326 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact -51.0 -16.266666666666666 2.066666666666663 36.133333333333326 0.06666666666666667 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-06 06:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-06 06:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000929/1_ECMWF/namidance/final/completed.txt False 0.2875 at least 1 case already under execution, exiting end check queue Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1745, 1711 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-06 12:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-06 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-06 12:00:00 8.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 2022-10-05 12:00:00 2022-10-05 18:00:00 2022-10-06 00:00:00 2022-10-06 06:00:00 2022-10-06 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/case.dance 2022-10-06 22:02:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:02:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:02:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:02:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:02:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:02:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:03:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:03:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:03:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:03:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:03:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:03:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:04:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:04:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:04:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:04:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:04:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:05:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:05:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:05:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:05:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:05:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:05:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:06:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:06:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:06:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:06:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:06:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:06:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:07:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:07:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:07:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:07:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:07:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:07:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:08:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:08:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:08:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:08:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:08:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:08:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:09:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:09:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:09:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:09:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:09:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:09:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:10:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:10:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:10:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:10:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:10:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:10:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:11:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:11:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:11:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:11:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:11:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:11:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:12:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:12:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:12:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:12:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:12:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:12:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:13:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 2022-10-06 22:13:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221006.12, forecast of 06-10-2022 12:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/locations.xml creating final O:\SSCS/2022/GDACS/1000931/1_HWRF/namidance ndt: 8 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/ 0 8 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 2.0999999999999943 25 (25, 511, 521) (25, 511, 521) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/ 1 8 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/ 2 8 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/ 3 8 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/ 4 8 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/ 5 8 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/ 6 8 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/ 7 8 True (1) numToAdd 289 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc 2.0999999999999943 1 (1, 511, 521) (1, 511, 521) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/final, forecast of 06-10-2022 12:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 457 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00000.jpg t=04-10-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00100.jpg t=05-10-2022 19:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00200.jpg t=06-10-2022 20:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00300.jpg t=07-10-2022 21:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00400.jpg t=08-10-2022 22:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 8 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF 2022-10-04 18:00:00 2022-10-06 12:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.12.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc 2.0 1 (1711, 1745) (1, 1711, 1745) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.14000286697247 1.9866695906432739 -16.231669533639142 36.22000292397661 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.0 2.066666666666677 -16.26666666666668 36.133333333333326 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact -51.0 -16.266666666666666 2.066666666666663 36.133333333333326 0.06666666666666667 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-06 12:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-06 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt True 1.2555555555555555 at least 1 case already under execution, exiting end check queue Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1745, 1711 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 521, 511 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4189P x 4108L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4168P x 4088L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000931/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-06 18:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-06 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid 2022-10-04 18:00:00 2022-10-06 18:00:00 9.0 2022-10-04 18:00:00 2022-10-05 00:00:00 2022-10-05 06:00:00 2022-10-05 12:00:00 2022-10-05 18:00:00 2022-10-06 00:00:00 2022-10-06 06:00:00 2022-10-06 12:00:00 2022-10-06 18:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 writeFolder=2022/GDACS/1000931/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000931\1_HWRF /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/case.dance 2022-10-07 00:15:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:15:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:15:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:15:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:16:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:16:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:16:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:16:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:16:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:17:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:17:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:17:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:17:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:17:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:17:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:18:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:18:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:18:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:18:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:18:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:18:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:19:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:19:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:19:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:19:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 2022-10-07 00:19:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/P1_MAXHEIGHT_END.jpg geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/20221006.18, forecast of 06-10-2022 18:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/locations.xml creating final O:\SSCS/2022/GDACS/1000931/1_HWRF/namidance ndt: 9 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18/ 0 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 2.0999999999999943 25 (25, 511, 521) (25, 511, 521) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00/ 1 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06/ 2 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12/ 3 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18/ 4 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00/ 5 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06/ 6 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12/ 7 9 False (3) numToAdd 25 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18/ 8 9 True (1) numToAdd 289 -50.96666666666667 2.0999999999999943 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc 2.0999999999999943 1 (1, 511, 521) (1, 511, 521) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final geoT (-51.0, 0.06666666666666667, 0.0, 36.133333333333326, 0.0, -0.06666666666666667) (511, 521) /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000931/1_HWRF/namidance/final, forecast of 06-10-2022 18:00 266231 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/OUT-T-ETA.nc 481 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00000.jpg t=04-10-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00100.jpg t=05-10-2022 19:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00200.jpg t=06-10-2022 20:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00300.jpg t=07-10-2022 21:00 creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/tmp/h_00400.jpg t=08-10-2022 22:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 9 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221004.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.12 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221005.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.00 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.06 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.12 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/20221006.18 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF 2022-10-04 18:00:00 2022-10-06 18:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221004.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221005.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/netcdf/20221006.18.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc 2.0 1 (1711, 1745) (1, 1711, 1745) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.14000286697247 1.9866695906432739 -16.231669533639142 36.22000292397661 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -51.0 2.066666666666677 -16.26666666666668 36.133333333333326 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact -51.0 -16.266666666666666 2.066666666666663 36.133333333333326 0.06666666666666667 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000931/1_HWRF ** Start date ** 2022-10-04 18:00:00 ** Final date ** 2022-10-06 18:00:00 determined dates from netcdf: 2022-10-04 18:00:00 2022-10-06 18:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000931/1_HWRF/namidance/final/completed.txt True 0.3647222222222222 check if folder exists /mnt/output/SSCS/2022/GDACS/1000933/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000933/1_HWRF/namidance creating /mnt/output/SSCS/2022/GDACS/1000933/1_HWRF/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s HWRF -o 2022/GDACS/1000933/1_HWRF>>/mnt/output/SSCS/2022/GDACS/1000933/1_HWRF/namidance/logexec.txt & end check queue