Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/DATA/gebco30_M1.tif [1/1] : 0Using internal nodata values (e.g. 32767) for image /mnt/output/SSCS/DATA/gebco30_M1.tif. Copying nodata values from source /mnt/output/SSCS/DATA/gebco30_M1.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clipgebco.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 824P x 285L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clipgebco.tif [1/1] : 0Using internal nodata values (e.g. 32767) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clipgebco.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clipgebco.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clip_resamp.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-10 12:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-10 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid creating grid file /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd bboxfile= /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/bbox.txt False trying with nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc Getting info on /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc -161.02000427246094 -105.9800033569336 6.630000114440918 25.770000457763672 -160.93333333333334 -106.0 6.666666666666667 25.666666666666668 gdalwarp -of GTiff -te -160.93333333333334 25.666666666666668 -106.0 6.666666666666667 /mnt/output/SSCS/DATA/gebco30_M1.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clipgebco.tif gdalwarp -of GTiff -tr 0.06666666666666667 0.06666666666666667 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clipgebco.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clip_resamp.tif geoT (-160.93333333333334, 0.06666666666666667, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) DSAA 824 285 -160.9 -106.03333333333333 6.699999999999999 25.633333333333333 -3796 6938 3054 rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clipgebco.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry_clip_resamp.tif bathymetry file created:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] 58 10 -160.239502 21.815889 334|Hawaii|Niihau|United States|Kahaino|5|-1|43 57 11 -160.233307 21.873791 335|Hawaii|Niihau|United States|Nonopapa|5|-1|12 57 11 -160.21278 21.88639 337|Hawaii|Niihau|United States|Kiekie|6|-1|12 55 17 -159.78333 22.01667 345|Hawaii|Kauai|United States|Waieli|6|-1|47 56 19 -159.648673 21.945001 352|Hawaii|Kauai|United States|Pakala Village|6|1130|19 57 22 -159.462403 21.88142 367|Hawaii|Kauai|United States|Poipu|6|1075|631 55 24 -159.352431 21.998151 375|Hawaii|Kauai|United States|Hanamaulu|5|3272|593 54 24 -159.347595 22.055731 376|Hawaii|Kauai|United States|Wailua|6|2083|336 52 24 -159.340556 22.189444 377|Hawaii|Kauai|United States|Moloaa|4|-1|20 54 24 -159.334 22.0846 378|Hawaii|Kauai|United States|Kapaa|3|9472|336 64 41 -158.18042 21.418733 397|Hawaii|Oahu|United States|Maili|5|5943|279 65 44 -158.030775 21.34415 414|Hawaii|Oahu|United States|Ewa Gentry|6|4939|5 65 44 -158.013199 21.3169 418|Hawaii|Oahu|United States|Ewa Beach|5|14650|5 65 44 -157.981333 21.325329 421|Hawaii|Oahu|United States|Iroquois Point|5|2462|5 65 45 -157.961371 21.341267 424|Hawaii|Oahu|United States|Hickam Housing|5|5471|2 60 45 -157.954803 21.68059 426|Hawaii|Oahu|United States|Kahuku|5|2097|47 65 45 -157.932602 21.347071 428|Hawaii|Oahu|United States|Aiea|3|9019|2 60 45 -157.925454 21.649067 430|Hawaii|Oahu|United States|Laie|5|4585|47 65 45 -157.914388 21.364854 434|Hawaii|Oahu|United States|Aliamanu|5|9918|2 61 46 -157.896576 21.5926 436|Hawaii|Oahu|United States|Punaluu|6|881|68 62 46 -157.875226 21.501379 437|Hawaii|Oahu|United States|Waikane|6|726|6 62 46 -157.862 21.5529 439|Hawaii|Oahu|United States|Kaaawa|5|1324|6 62 46 -157.84816 21.548088 441|Hawaii|Oahu|United States|Kahana|4|-1|6 64 48 -157.765766 21.3724 446|Hawaii|Oahu|United States|Maunawili|5|4869|3 66 48 -157.760895 21.28858 447|Hawaii|Oahu|United States|Aina Haina|5|-1|432 63 48 -157.760696 21.44882 448|Hawaii|Oahu|United States|Kaneohe Station|5|11827|315 64 48 -157.746704 21.40423 449|Hawaii|Oahu|United States|Kailua|4|36513|3 64 48 -157.719942 21.388052 450|Hawaii|Oahu|United States|Lanikai|6|-1|3 66 48 -157.7052 21.280411 453|Hawaii|Oahu|United States|Maunalua|5|-1|432 69 55 -157.259293 21.099779 462|Hawaii|Molokai|United States|Halena|5|-1|151 69 59 -157.023102 21.09651 473|Hawaii|Molokai|United States|Kaunakakai|5|2726|51 69 60 -156.957397 21.075439 478|Hawaii|Molokai|United States|Moku|5|-1|10 69 61 -156.881195 21.058069 480|Hawaii|Molokai|United States|Kamalo|5|-1|42 69 61 -156.835 21.088611 481|Hawaii|Molokai|United States|Kaluaaha|4|-1|42 69 62 -156.8325 21.06583 483|Hawaii|Molokai|United States|Ualapue|6|-1|241 69 62 -156.8004 21.082041 484|Hawaii|Molokai|United States|Pukoo|5|-1|241 68 63 -156.76139 21.10028 486|Hawaii|Molokai|United States|Waialua|6|3743|174 68 63 -156.740097 21.15839 488|Hawaii|Molokai|United States|Halawa|5|-1|174 73 65 -156.621094 20.820299 496|Hawaii|Maui|United States|Olowalu|5|-1|72 70 66 -156.557007 20.999201 497|Hawaii|Maui|United States|Kahakuloa|5|-1|81 73 66 -156.514694 20.803169 498|Hawaii|Maui|United States|Maalaea|6|454|29 76 68 -156.420303 20.60634 509|Hawaii|Maui|United States|Keoneoio|5|-1|43 72 72 -156.136389 20.848611 517|Hawaii|Maui|United States|Wailua|4|2153|27 75 72 -156.123993 20.643209 518|Hawaii|Maui|United States|Kaupo|5|-1|2 75 73 -156.054596 20.66032 520|Hawaii|Maui|United States|Kipahulu|5|-1|363 73 74 -156.024722 20.784722 523|Hawaii|Maui|United States|Kaeleku|4|-1|143 75 74 -156.020096 20.69272 524|Hawaii|Maui|United States|Muolea|5|-1|1198 75 74 -156.0125 20.698611 525|Hawaii|Maui|United States|Haou|4|-1|1198 74 74 -156.000595 20.709999 526|Hawaii|Maui|United States|Puuiki|5|-1|182 74 74 -155.986694 20.757151 528|Hawaii|Maui|United States|Hana|6|709|182 101 79 -155.698395 18.957569 552|Hawaii|Hawaii|United States|Waiahukini|5|-1|525 100 80 -155.617004 18.979601 553|Hawaii|Hawaii|United States|Kaalualu|5|-1|1420 99 81 -155.554199 19.096901 557|Hawaii|Hawaii|United States|Honuapo|5|-1|1146 98 81 -155.53667 19.13861 558|Hawaii|Hawaii|United States|Hilea|6|-1|636 85 86 -155.228897 19.976629 564|Hawaii|Hawaii|United States|Papaaloa|5|-1|212 95 88 -155.03944 19.35889 574|Hawaii|Hawaii|United States|Royal Gardens|6|-1|906 95 89 -155.014099 19.34444 575|Hawaii|Hawaii|United States|Kupaahu|5|-1|1665 95 89 -154.97951 19.354803 576|Hawaii|Hawaii|United States|Kalapana|4|-1|1665 91 90 -154.933304 19.586969 578|Hawaii|Hawaii|United States|Makuu|5|-1|172 94 91 -154.883333 19.429722 580|Hawaii|Hawaii|United States|Opihikao|4|-1|2059 93 91 -154.853104 19.466881 581|Hawaii|Hawaii|United States|Pohoiki|5|-1|1003 15 732 -112.140602 24.63921 2046|Baja California Sur| |Mexico|Puerto Magdalena|5|-1|25 13 732 -112.100197 24.791889 2051|Baja California Sur| |Mexico|San Carlos|5|-1|3 19 741 -111.55 24.433333 2064|Baja California Sur| |Mexico|Puerto Charley|6|-1|4 3 749 -111.033333 25.466667 2075|Baja California Sur| |Mexico|Santa Marta|6|-1|241 9 752 -110.828505 25.049678 2080|Baja California Sur| |Mexico|Los Burros|5|-1|110 42 765 -109.9142 22.88093 2099|Baja California Sur| |Mexico|San Lucas|5|-1|707 25 767 -109.819099 23.99324 2102|Baja California Sur| |Mexico|Ensenada de los Muertos|5|-1|601 41 767 -109.791801 22.95153 2104|Baja California Sur| |Mexico|El Tule|5|-1|795 39 769 -109.677498 23.06514 2106|Baja California Sur| |Mexico|San Jose del Cabo|5|-1|259 31 771 -109.530159 23.57856 2108|Baja California Sur| |Mexico|Punta Colorada|4|-1|2 38 771 -109.508301 23.154551 2109|Baja California Sur| |Mexico|La Fortuna|5|-1|50 32 772 -109.492299 23.548635 2110|Baja California Sur| |Mexico|Punta Arena|4|-1|60 37 772 -109.4422 23.214569 2112|Baja California Sur| |Mexico|El Cardoncito|5|-1|49 19 801 -107.536111 24.3725 2125|Sinaloa| |Mexico|Las Arenitas|6|-1|2 gauges file created:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/gauges.dat 2022-07-09 00:00:00 2022-07-10 12:00:00 4.0 2022-07-09 00:00:00 ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 writeFolder=2022/GDACS/1000894/2_ECMWF restart=False ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/case.dance 2022-07-12 09:03:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:03:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:03:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:03:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:03:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:03:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:04:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:04:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:04:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:04:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:04:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:04:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:05:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:05:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:05:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:05:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:05:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:05:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 2022-07-12 09:06:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220709.00, forecast of 09-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/locations.xml 2022-07-09 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/V_12.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/20220709.00.tropical_cyclone.nc rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/20220709.00.tropical_cyclone.nc cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/case.dance 2022-07-12 09:06:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:06:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:07:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:07:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:07:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:07:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:07:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:07:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:08:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:08:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:08:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:08:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:08:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:08:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:09:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:09:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:09:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:09:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 2022-07-12 09:09:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220709.12, forecast of 09-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/locations.xml 2022-07-10 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/V_12.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/20220709.12.tropical_cyclone.nc rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/20220709.12.tropical_cyclone.nc cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/case.dance 2022-07-12 09:10:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:10:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:10:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:10:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:11:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:11:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:11:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:11:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:11:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:11:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:12:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:12:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:12:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:12:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:12:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:12:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:13:03: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 2022-07-12 09:13:13: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220710.00, forecast of 10-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/locations.xml 2022-07-10 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/V_12.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/20220710.00.tropical_cyclone.nc rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/20220710.00.tropical_cyclone.nc cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/case.dance 2022-07-12 09:13:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:13:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:14:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:14:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:14:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:14:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:14:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:14:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:15:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:15:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:15:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:15:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:15:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:15:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:16:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:16:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:16:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 2022-07-12 09:16:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220710.12, forecast of 10-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 4 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 4 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 4 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 4 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 4 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 10-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 433 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00100.jpg t=10-07-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00300.jpg t=12-07-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 4 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-10 12:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif False ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-11 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-11 00:00:00 checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 0.345 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000894/2_GFS>>/mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance/logexec.txt & end check queue Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= exec arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-12 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-12 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid 2022-07-09 00:00:00 2022-07-12 00:00:00 7.0 2022-07-09 00:00:00 2022-07-09 12:00:00 2022-07-10 00:00:00 2022-07-10 12:00:00 2022-07-11 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/V_12.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/case.dance 2022-07-12 10:03:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:03:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:03:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:03:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:03:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:03:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:04:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:04:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:04:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:04:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:04:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:04:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:05:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:05:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:05:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:05:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:05:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:06:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:06:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:06:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:06:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:06:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:06:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:07:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:07:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:07:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:07:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:07:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:07:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 2022-07-12 10:08:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220711.00, forecast of 11-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/locations.xml 2022-07-11 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/V_12.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/20220711.00.tropical_cyclone.nc rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/20220711.00.tropical_cyclone.nc cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/case.dance 2022-07-12 10:08:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:08:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:08:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:09:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:09:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:09:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:09:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:09:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:09:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:10:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:10:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:10:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:10:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:10:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:10:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:11:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:11:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:11:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:11:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:11:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:11:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:12:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:12:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:12:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:12:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:12:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:12:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 2022-07-12 10:13:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220711.12, forecast of 11-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/locations.xml 2022-07-12 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/V_12.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/20220711.12.tropical_cyclone.nc rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/20220711.12.tropical_cyclone.nc cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/case.dance 2022-07-12 10:13:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:13:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:14:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:14:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:14:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:14:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:14:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:14:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:15:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:15:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. 2022-07-12 10:15:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:15:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:15:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:15:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:16:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:16:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:16:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:16:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:16:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:16:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:17:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 2022-07-12 10:17:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220712.00, forecast of 12-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 7 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 7 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 7 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 7 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 7 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/ 4 7 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/ 5 7 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/ 6 7 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 12-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 577 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00100.jpg t=10-07-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00300.jpg t=12-07-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00500.jpg t=14-07-2022 05:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 7 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-12 00:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.00.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= exec arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-12 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-12 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 1.0308333333333333 at least 1 case already under execution, exiting end check queue Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-12 12:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-12 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid 2022-07-09 00:00:00 2022-07-12 12:00:00 8.0 2022-07-09 00:00:00 2022-07-09 12:00:00 2022-07-10 00:00:00 2022-07-10 12:00:00 2022-07-11 00:00:00 2022-07-11 12:00:00 2022-07-12 00:00:00 2022-07-12 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/V_12.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/case.dance 2022-07-12 21:03:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:03:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:03:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:03:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:04:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:04:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:04:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:04:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:04:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:04:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:05:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:05:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:05:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:05:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:05:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:05:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:06:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:06:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 2022-07-12 21:06:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220712.12, forecast of 12-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 8 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 8 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 8 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 8 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 8 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/ 4 8 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/ 5 8 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/ 6 8 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/ 7 8 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 12-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 625 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00100.jpg t=10-07-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00300.jpg t=12-07-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00500.jpg t=14-07-2022 05:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00600.jpg t=15-07-2022 06:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 8 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-12 12:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.12.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-12 12:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-12 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 0.205 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000894/2_GFS>>/mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance/logexec.txt & end check queue Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-13 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-13 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid 2022-07-09 00:00:00 2022-07-13 00:00:00 9.0 2022-07-09 00:00:00 2022-07-09 12:00:00 2022-07-10 00:00:00 2022-07-10 12:00:00 2022-07-11 00:00:00 2022-07-11 12:00:00 2022-07-12 00:00:00 2022-07-12 12:00:00 2022-07-13 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/V_12.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/case.dance 2022-07-13 09:03:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:03:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:03:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:03:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:03:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:03:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:04:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:04:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:04:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:04:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:04:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:04:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:05:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:05:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:05:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:05:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:05:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:05:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:06:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 2022-07-13 09:06:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220713.00, forecast of 13-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 9 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 9 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 9 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 9 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 9 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/ 4 9 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/ 5 9 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/ 6 9 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/ 7 9 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/ 8 9 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 13-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 673 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00100.jpg t=10-07-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00300.jpg t=12-07-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00500.jpg t=14-07-2022 05:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00600.jpg t=15-07-2022 06:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 9 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-13 00:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.00.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-13 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-13 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 0.1963888888888889 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000894/2_GFS>>/mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance/logexec.txt & end check queue Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-13 12:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-13 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid 2022-07-09 00:00:00 2022-07-13 12:00:00 10.0 2022-07-09 00:00:00 2022-07-09 12:00:00 2022-07-10 00:00:00 2022-07-10 12:00:00 2022-07-11 00:00:00 2022-07-11 12:00:00 2022-07-12 00:00:00 2022-07-12 12:00:00 2022-07-13 00:00:00 2022-07-13 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/V_12.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/case.dance 2022-07-13 21:00:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:00:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:00:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:00:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:00:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:00:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:01:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:01:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:01:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:01:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:01:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:02:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:02:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:02:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:02:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:02:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:02:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:03:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:03:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 2022-07-13 21:03:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220713.12, forecast of 13-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 10 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 10 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/ 4 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/ 5 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/ 6 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/ 7 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/ 8 10 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/ 9 10 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 13-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 721 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00100.jpg t=10-07-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00300.jpg t=12-07-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00500.jpg t=14-07-2022 05:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00600.jpg t=15-07-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00700.jpg t=16-07-2022 07:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 10 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-13 12:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.12.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-13 12:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-13 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 0.1525 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000894/2_GFS>>/mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance/logexec.txt & end check queue Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-14 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-14 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid 2022-07-09 00:00:00 2022-07-14 00:00:00 11.0 2022-07-09 00:00:00 2022-07-09 12:00:00 2022-07-10 00:00:00 2022-07-10 12:00:00 2022-07-11 00:00:00 2022-07-11 12:00:00 2022-07-12 00:00:00 2022-07-12 12:00:00 2022-07-13 00:00:00 2022-07-13 12:00:00 2022-07-14 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/V_12.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/case.dance 2022-07-14 09:00:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:00:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:00:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:00:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:00:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:00:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:01:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:01:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:01:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:01:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:01:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:01:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:02:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:02:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:02:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:02:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:02:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:02:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 2022-07-14 09:03:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220714.00, forecast of 14-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 11 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 11 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/ 4 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/ 5 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/ 6 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/ 7 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/ 8 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/ 9 11 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/ 10 11 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 14-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 769 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00100.jpg t=10-07-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00300.jpg t=12-07-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00500.jpg t=14-07-2022 05:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00600.jpg t=15-07-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00700.jpg t=16-07-2022 07:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 11 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-14 00:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220714.00.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-14 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-14 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 0.15722222222222224 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000894/2_GFS>>/mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance/logexec.txt & end check queue Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-14 12:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-14 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid 2022-07-09 00:00:00 2022-07-14 12:00:00 12.0 2022-07-09 00:00:00 2022-07-09 12:00:00 2022-07-10 00:00:00 2022-07-10 12:00:00 2022-07-11 00:00:00 2022-07-11 12:00:00 2022-07-12 00:00:00 2022-07-12 12:00:00 2022-07-13 00:00:00 2022-07-13 12:00:00 2022-07-14 00:00:00 2022-07-14 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/V_12.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/case.dance 2022-07-14 21:00:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:00:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:00:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:00:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:00:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:00:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:01:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:01:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:01:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:01:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:01:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:01:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:02:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:02:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:02:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:02:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:02:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 2022-07-14 21:03:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220714.12, forecast of 14-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 12 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 12 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/ 4 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/ 5 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/ 6 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/ 7 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/ 8 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/ 9 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/ 10 12 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/ 11 12 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 14-07-2022 12:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 817 creating animation with step: 8 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00600.jpg t=15-07-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00800.jpg t=17-07-2022 08:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-14 12:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220714.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220714.12.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-14 12:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-14 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 0.1836111111111111 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000894/2_GFS>>/mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance/logexec.txt & end check queue Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 782, 272 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 824, 285 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6615P x 2309L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 6592P x 2280L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= siprapp01p-shak operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000894/2_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-15 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-15 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid 2022-07-09 00:00:00 2022-07-15 00:00:00 13.0 2022-07-09 00:00:00 2022-07-09 12:00:00 2022-07-10 00:00:00 2022-07-10 12:00:00 2022-07-11 00:00:00 2022-07-11 12:00:00 2022-07-12 00:00:00 2022-07-12 12:00:00 2022-07-13 00:00:00 2022-07-13 12:00:00 2022-07-14 00:00:00 2022-07-14 12:00:00 2022-07-15 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/V_12.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/HA_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/U_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/V_12.0h.grd /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 writeFolder=2022/GDACS/1000894/2_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000894\2_ECMWF /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/case.dance 2022-07-15 09:00:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:00:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:00:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:00:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:00:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:00:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:01:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:01:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:01:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:01:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:01:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:01:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:02:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:02:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:02:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:02:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:02:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:02:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:03:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:03:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 2022-07-15 09:03:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/P1_MAXHEIGHT_END.jpg geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/20220715.00, forecast of 15-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/locations.xml creating final O:\SSCS/2022/GDACS/1000894/2_ECMWF/namidance ndt: 13 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00/ 0 13 False (3) numToAdd 49 -160.9 6.699999999999999 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 6.699999999999999 49 (49, 285, 824) (49, 285, 824) created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12/ 1 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00/ 2 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12/ 3 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00/ 4 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12/ 5 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00/ 6 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12/ 7 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00/ 8 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12/ 9 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00/ 10 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12/ 11 13 False (3) numToAdd 49 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00/ 12 13 True (1) numToAdd 289 -160.9 6.699999999999999 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc 6.699999999999999 1 (1, 285, 824) (1, 285, 824) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final geoT (-160.93333333333334, 0.06666666666666668, 0.0, 25.666666666666668, 0.0, -0.06666666666666667) (285, 824) /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000894/2_ECMWF/namidance/final, forecast of 15-07-2022 00:00 234840 0.0 0.0 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/OUT-T-ETA.nc 865 creating animation with step: 8 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00000.jpg t=09-07-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00200.jpg t=11-07-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00400.jpg t=13-07-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00600.jpg t=15-07-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/tmp/h_00800.jpg t=17-07-2022 08:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 13 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220709.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220710.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220711.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220712.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220713.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220714.12 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/20220715.00 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF 2022-07-09 00:00:00 2022-07-15 00:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220709.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220710.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220711.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220712.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220713.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220714.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220714.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/netcdf/20220715.00.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc 6.630000114440918 1 (272, 782) (1, 272, 782) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -161.05524114884733 6.563647444866973 -105.93024114884733 25.80531411153364 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te -160.93333333333334 6.666666666666675 -106.00000000000003 25.666666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact -160.93333333333334 -106.0 6.666666666666664 25.666666666666668 0.06666666666666668 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/bathymetry.tif ... file already existing, not copied ...copying /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/outCostalImpact.txt error in generating coastalImpact no such column: sqliteExt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000894/2_ECMWF ** Start date ** 2022-07-09 00:00:00 ** Final date ** 2022-07-15 00:00:00 determined dates from netcdf: 2022-07-09 00:00:00 2022-07-15 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000894/2_ECMWF/namidance/final/completed.txt True 0.1836111111111111 check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS check if folder exists /mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance submitting a new case python /mnt/output/SSCS/script_nami/execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000894/2_GFS>>/mnt/output/SSCS/2022/GDACS/1000894/2_GFS/namidance/logexec.txt & end check queue