Input file size is 43200, 21600 0...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 00:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid creating grid file /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd bboxfile= /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/bbox.txt False trying with nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc Getting info on /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc 26.69 65.82 -31.83 -5.0 26.733333333333334 65.73333333333333 -31.733333333333334 -5.066666666666666 gdal_translate -of GSAG -projwin 26.733333333333334 -5.066666666666666 65.73333333333333 -31.733333333333334 -tr 0.06666666666666667 0.06666666666666667 /mnt/output/SSCS/DATA/gebco30_M1.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd bathymetry file created:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] 398 42 29.542231 -31.63261 33643|Oos-Kaap (Eastern Cape)| |South Africa|Umzimvubu|5|5935|25.0 397 43 29.616667 -31.55 33652|Oos-Kaap (Eastern Cape)| |South Africa|Sea View|6|-1|8.0 397 44 29.683333 -31.516667 33667|Oos-Kaap (Eastern Cape)| |South Africa|Manteku|6|-1|83.0 394 48 29.933333 -31.35 33698|Oos-Kaap (Eastern Cape)| |South Africa|Kilroe Beach|6|-1|49.0 392 50 30.083333 -31.166667 33717|Oos-Kaap (Eastern Cape)| |South Africa|Xolobeni|6|-1|40.0 390 52 30.195305 -31.055076 33731|KwaZulu Natal| |South Africa|Port Edward|4|-1|41.0 388 53 30.283333 -30.9 33739|KwaZulu Natal| |South Africa|Bushyvales|6|-1|13.0 387 55 30.37871 -30.851339 33743|KwaZulu Natal| |South Africa|Margate|3|33733|49.0 386 55 30.39843 -30.78573 33745|KwaZulu Natal| |South Africa|Izotsha|5|-1|37.0 385 56 30.4636 -30.721531 33749|KwaZulu Natal| |South Africa|Port Shepstone|3|52324|53.0 383 57 30.5 -30.633333 33751|KwaZulu Natal| |South Africa|Glanfield|6|-1|44.0 381 58 30.633333 -30.483333 33759|KwaZulu Natal| |South Africa|Mtwalume|6|-1|18.0 380 59 30.68021 -30.4021 33763|KwaZulu Natal| |South Africa|Sezela|4|-1|36.0 379 60 30.75115 -30.305321 33768|KwaZulu Natal| |South Africa|Park Rynie|3|-1|40.0 377 61 30.8 -30.2 33770|KwaZulu Natal| |South Africa|Umkomaas|5|20120|26.0 375 62 30.85993 -30.0919 33776|KwaZulu Natal| |South Africa|Amanzimtoti|3|-1|44.0 375 62 30.882059 -30.05678 33777|KwaZulu Natal| |South Africa|Kingsborough|4|-1|44.0 374 63 30.962755 -29.980103 33781|KwaZulu Natal| |South Africa|Isipingo|3|-1|46.0 372 65 31.034288 -29.843374 33790|KwaZulu Natal| |South Africa|Addington|6|-1|78.0 370 65 31.066667 -29.75 33792|KwaZulu Natal| |South Africa|La Lucia|6|-1|35.0 369 66 31.1 -29.683333 33796|KwaZulu Natal| |South Africa|Selection Beach|6|-1|48.0 368 66 31.133333 -29.633333 33799|KwaZulu Natal| |South Africa|La Mercy|6|-1|45.0 367 67 31.166667 -29.533333 33802|KwaZulu Natal| |South Africa|Fraser|6|-1|51.0 366 68 31.283333 -29.45 33806|KwaZulu Natal| |South Africa|Tinley Manor|6|-1|45.0 363 70 31.3738 -29.27236 33812|KwaZulu Natal| |South Africa|Darnall|5|-1|14.0 362 72 31.5 -29.216667 33819|KwaZulu Natal| |South Africa|Tugela Mouth|6|-1|30.0 360 73 31.633333 -29.083333 33826|KwaZulu Natal| |South Africa|Dokodweni|6|-1|8.0 359 75 31.7 -28.983333 33829|KwaZulu Natal| |South Africa|Highfield|6|-1|22.0 358 76 31.76757 -28.948271 33833|KwaZulu Natal| |South Africa|Mtunzini|5|-1|15.0 350 85 32.416395 -28.398256 33875|KwaZulu Natal| |South Africa|Mapelana|6|-1|17.0 314 88 32.569551 -25.968945 33893|Maputo| |Mozambique|Maputo|1|1176839|2.0 334 90 32.733333 -27.316667 33915|KwaZulu Natal| |South Africa|Mabibi|6|-1|85.0 307 92 32.85 -25.533333 33930|Maputo| |Mozambique|Linchica|6|-1|13.0 328 92 32.866667 -26.916667 33932|KwaZulu Natal| |South Africa|Enkovukeni|6|-1|41.0 326 92 32.883333 -26.833333 33935|Maputo| |Mozambique|David|6|-1|16.0 319 93 32.9 -26.35 33938|Maputo| |Mozambique|Machavene|6|-1|55.0 317 93 32.9 -26.183333 33939|Maputo| |Mozambique|Cimbene|6|-1|45.0 303 98 33.266667 -25.266667 33989|Gaza| |Mozambique|Gueima|6|-1|8.0 302 101 33.466667 -25.2 34013|Gaza| |Mozambique|Inhampsi|6|-1|8.0 302 103 33.583333 -25.166667 34021|Gaza| |Mozambique|Contra Costa|6|-1|44.0 301 104 33.65 -25.116667 34037|Gaza| |Mozambique|Jacob|6|-1|18.0 298 114 34.316667 -24.9 34119|Gaza| |Mozambique|Gafaria|6|-1|36.0 297 115 34.366667 -24.866667 34129|Gaza| |Mozambique|Nangalete|6|-1|22.0 296 120 34.716667 -24.783333 34167| | |Mozambique|Induna|6|-1|12.0 226 120 34.728661 -20.160851 34169|Sofala| |Mozambique|Nova Sofala|5|-1|2.0 221 123 34.933333 -19.783333 34236|Sofala| |Mozambique|Damiao|6|-1|6.0 220 124 35.016667 -19.716667 34271|Sofala| |Mozambique|Nhangau|6|-1|6.0 219 126 35.116667 -19.65 34309|Sofala| |Mozambique|Panaca|6|-1|7.0 242 126 35.12685 -21.178699 34312| | |Mozambique|Bartolomeu Dias|5|-1|11.0 291 127 35.166667 -24.483333 34319|Inhambane| |Mozambique|Siane|6|-1|30.0 246 127 35.166667 -21.483333 34320| | |Mozambique|Natalia|6|-1|5.0 251 128 35.25 -21.766667 34336|Inhambane| |Mozambique|Caulino|6|-1|9.0 252 129 35.3 -21.9 34341|Inhambane| |Mozambique|Castigo|6|-1|4.0 217 129 35.3 -19.533333 34342|Sofala| |Mozambique|Tama|6|-1|14.0 255 129 35.30991 -22.07822 34343|Inhambane| |Mozambique|Xetoquica|5|-1|15.0 254 129 35.320992 -21.989571 34344|Inhambane| |Mozambique|Vilanculos|5|-1|23.0 280 129 35.333333 -23.716667 34345|Inhambane| |Mozambique|Beula|6|-1|2.0 256 129 35.333333 -22.133333 34346|Inhambane| |Mozambique|China|6|-1|11.0 282 129 35.34388 -23.872959 34348| | |Mozambique|Maxixe|3|118408|8.0 281 129 35.35 -23.816667 34350| | |Mozambique|Chicoque|6|-1|8.0 216 130 35.366667 -19.483333 34351|Sofala| |Mozambique|Jonja|6|-1|11.0 277 130 35.383333 -23.516667 34355|Inhambane| |Mozambique|Mabsil|6|-1|15.0 280 130 35.4 -23.7 34360| | |Mozambique|Marivate|6|-1|5.0 215 130 35.4 -19.383333 34361|Sofala| |Mozambique|Bingue|6|-1|10.0 252 131 35.45 -21.85 34368| | |Mozambique|Mariano|6|-1|5.0 250 131 35.45 -21.7 34369|Inhambane|Ilha do Bazaruto|Mozambique|Asneira|6|-1|34.0 285 131 35.466667 -24.066667 34370|Inhambane| |Mozambique|Guinjala|6|-1|19.0 214 131 35.466667 -19.3 34372|Sofala| |Mozambique|Rupia|6|-1|6.0 284 131 35.483333 -23.966667 34376|Inhambane| |Mozambique|Ingale|6|-1|8.0 265 132 35.5 -22.75 34379| | |Mozambique|Maguemba|6|-1|10.0 257 132 35.5 -22.233333 34380|Inhambane| |Mozambique|Uetela|6|-1|56.0 267 132 35.516667 -22.866667 34383| | |Mozambique|Macashale|6|-1|5.0 262 132 35.516667 -22.5 34384| | |Mozambique|Afo|6|-1|21.0 282 132 35.533333 -23.866667 34387|Inhambane| |Mozambique|Praia do Tofo|6|-1|74.0 281 132 35.533333 -23.783333 34388| | |Mozambique|Miramar|6|-1|32.0 213 132 35.54121 -19.27862 34391|Sofala| |Mozambique|Machesse|5|-1|9.0 203 145 36.416667 -18.633333 34456|Zambezia| |Mozambique|Chimuaza|6|-1|2.0 203 146 36.464401 -18.583389 34458|Zambezia| |Mozambique|Vila do Chinde|5|-1|7.0 201 147 36.516667 -18.45 34461|Zambezia| |Mozambique|Nhamatamanga|6|-1|5.0 199 149 36.683333 -18.35 34472|Zambezia| |Mozambique|Mulia|6|-1|6.0 199 150 36.733333 -18.3 34475|Zambezia| |Mozambique|Barra|6|-1|12.0 195 153 36.9 -18.083333 34493|Zambezia| |Mozambique|Ocone|6|-1|3.0 194 153 36.9 -18.0 34494|Zambezia| |Mozambique|Quelimane do Sal|6|-1|2.0 194 154 36.983333 -17.966667 34502|Zambezia| |Mozambique|Mendozo|6|-1|5.0 193 154 37.033333 -17.933333 34506|Zambezia| |Mozambique|Magromane|6|-1|3.0 189 158 37.283333 -17.683333 34520|Zambezia| |Mozambique|Tomodo|6|-1|44.0 188 161 37.45 -17.616667 34533| | |Mozambique|Mutiba|6|-1|11.0 186 164 37.683333 -17.45 34545|Zambezia| |Mozambique|Raraga|6|-1|30.0 184 168 37.925129 -17.340969 34558|Zambezia| |Mozambique|Morrua|5|-1|2.0 183 171 38.142841 -17.25993 34573|Zambezia| |Mozambique|Pebane|5|-1|5.0 181 175 38.366667 -17.15 34590|Zambezia| |Mozambique|Mutadua|6|-1|8.0 180 179 38.69141 -17.060419 34604|Zambezia| |Mozambique|Moebase|5|-1|3.0 15 181 38.77272 -6.050517 34606|Pwani| |Tanzania|Sadani|5|-1|4.0 11 182 38.8508 -5.771498 34609|Tanga| |Tanzania|Mkwaja|5|-1|19.0 7 184 38.966667 -5.55 34621|Tanga| |Tanzania|Ushongo Mabaoni|6|-1|7.0 5 184 38.978729 -5.416612 34622|Tanga| |Tanzania|Pangani|4|8224|10.0 179 184 39.016667 -17.0 34625|Zambezia| |Mozambique|Chululu|6|-1|8.0 5 184 39.016769 -5.381784 34627|Tanga| |Tanzania|Vumbi|5|-1|10.0 3 185 39.036709 -5.250775 34632|Tanga| |Tanzania|Kilale|5|-1|12.0 178 186 39.1 -16.95 34638|Zambezia| |Mozambique|Caramaca|6|-1|3.0 177 186 39.133333 -16.866667 34643|Nampula| |Mozambique|Mocareja|6|-1|7.0 24 187 39.216667 -6.666667 34666|Dar-es-Salaam| |Tanzania|Konduchi|6|-1|3.0 18 188 39.25 -6.266667 34671|Mjini-Magharibi (Zanzibar Urban/West)|Zanzibar|Tanzania|Mchamba Wima|6|-1|2.0 37 188 39.266667 -7.5 34676|Pwani| |Tanzania|Magawa|6|-1|4.0 38 188 39.26738 -7.627666 34679|Pwani| |Tanzania|Msindaji|5|-1|4.0 50 188 39.278858 -8.389074 34682|Lindi| |Tanzania|Somanga|5|-1|5.0 19 188 39.280201 -6.313447 34683|Mjini-Magharibi (Zanzibar Urban/West)|Zanzibar|Tanzania|Fumba|5|-1|12.0 25 188 39.283333 -6.75 34686|Dar-es-Salaam| |Tanzania|Msasani|6|-1|10.0 34 189 39.3 -7.3 34690|Pwani| |Tanzania|Dondo|6|-1|3.0 11 189 39.3 -5.816667 34691|Kaskazini-Unguja (Zanzibar North)|Zanzibar|Tanzania|Bwereu|6|-1|3.0 10 189 39.305729 -5.733789 34692|Kaskazini-Unguja (Zanzibar North)|Zanzibar|Tanzania|Banda Kuu|5|-1|61.0 26 189 39.322571 -6.829703 34695|Dar-es-Salaam| |Tanzania|Magogoni|5|-1|11.0 48 189 39.333333 -8.266667 34696|Pwani| |Tanzania|Pombwe|6|-1|6.0 35 189 39.337311 -7.411049 34698|Pwani| |Tanzania|Kisiju|5|-1|3.0 12 189 39.35 -5.85 34702|Kaskazini-Unguja (Zanzibar North)|Zanzibar|Tanzania|Gazija|6|-1|24.0 47 189 39.358471 -8.192869 34704|Pwani| |Tanzania|Jaja|5|-1|4.0 46 190 39.37352 -8.110994 34707|Pwani| |Tanzania|Mbwera|5|-1|14.0 14 190 39.37571 -5.988597 34708|Kaskazini-Unguja (Zanzibar North)|Zanzibar|Tanzania|Gulioni|4|-1|23.0 175 190 39.383333 -16.716667 34710| | |Mozambique|Napito|6|-1|14.0 45 190 39.39599 -8.049792 34714|Pwani| |Tanzania|Kiechuru|6|-1|12.0 15 190 39.4 -6.05 34716|Kaskazini-Unguja (Zanzibar North)|Zanzibar|Tanzania|Mdudu Mdogo|6|-1|22.0 15 190 39.416667 -6.1 34719|Kusini Unguja (Zanzibar Central/South)|Zanzibar|Tanzania|Dikoni|6|-1|22.0 174 190 39.433333 -16.683333 34725|Nampula| |Mozambique|Namorre|6|-1|2.0 27 191 39.473808 -6.882236 34733|Dar-es-Salaam| |Tanzania|Bandarini|5|-1|4.0 21 191 39.476601 -6.447793 34734|Kusini Unguja (Zanzibar Central/South)|Zanzibar|Tanzania|Mkunguni|5|-1|65.0 28 192 39.5 -6.933333 34739|Dar-es-Salaam| |Tanzania|Kutani|6|-1|147.0 58 192 39.511909 -8.928239 34741|Lindi| |Tanzania|Kilwa Masoko|5|-1|200.0 31 192 39.516667 -7.133333 34742|Pwani| |Tanzania|Buuni Village|6|-1|20.0 16 192 39.516667 -6.15 34743|Kusini Unguja (Zanzibar Central/South)|Zanzibar|Tanzania|Pingwe|6|-1|78.0 18 192 39.527401 -6.272838 34745|Kusini Unguja (Zanzibar Central/South)|Zanzibar|Tanzania|Paje|5|-1|4.0 21 192 39.533333 -6.45 34747|Kusini Unguja (Zanzibar Central/South)|Zanzibar|Tanzania|Kipandoni|6|-1|217.0 20 192 39.55 -6.383333 34751|Kusini Unguja (Zanzibar Central/South)|Zanzibar|Tanzania|Tongoni|6|-1|10.0 44 194 39.65 -7.983333 34766|Pwani| |Tanzania|Mwera|6|-1|4.0 6 194 39.65 -5.466667 34767|Kusini-Pemba (Pemba South)| |Tanzania|Jeni|6|-1|115.0 172 194 39.677161 -16.53754 34771|Nampula| |Mozambique|Coropoa|6|-1|8.0 5 195 39.706181 -5.374215 34778|Kusini-Pemba (Pemba South)|Pemba|Tanzania|Sitarehe|5|-1|2.0 69 195 39.71067 -9.645308 34780|Lindi| |Tanzania|Ruvu|5|-1|93.0 70 195 39.713421 -9.721351 34781|Lindi| |Tanzania|Mchinga|5|-1|188.0 171 195 39.71838 -16.479309 34783|Nampula| |Mozambique|Larde|5|-1|6.0 5 195 39.733391 -5.41419 34786|Kusini-Pemba (Pemba South)|Pemba|Tanzania|Kengeja|5|-1|2.0 44 196 39.766667 -7.983333 34798|Pwani| |Tanzania|Chole|6|-1|245.0 3 196 39.771919 -5.243979 34799|Kusini-Pemba (Pemba South)|Pemba|Tanzania|Chake|5|-1|74.0 4 196 39.783333 -5.3 34802|Kusini-Pemba (Pemba South)|Pemba|Tanzania|Jojo|6|-1|143.0 4 196 39.8 -5.35 34806|Kusini-Pemba (Pemba South)|Pemba|Tanzania|Kitwea|6|-1|143.0 3 196 39.833333 -5.25 34813|Kusini-Pemba (Pemba South)|Pemba|Tanzania|Hurumuzi|6|-1|74.0 41 197 39.866667 -7.766667 34821|Pwani| |Tanzania|Jimbo|6|-1|171.0 170 197 39.883333 -16.383333 34825|Nampula| |Mozambique|Natiquinde|6|-1|12.0 167 199 39.983333 -16.216667 34838|Nampula| |Mozambique|Namacoto|6|-1|2.0 166 199 40.033333 -16.116667 34843|Nampula| |Mozambique|Namuali|6|-1|2.0 165 200 40.083333 -16.066667 34850|Nampula| |Mozambique|Nantapa|6|-1|11.0 162 202 40.225609 -15.83641 34867|Nampula| |Mozambique|Quinga|5|-1|12.0 161 203 40.25 -15.783333 34870|Nampula| |Mozambique|Metula|6|-1|29.0 160 204 40.333333 -15.7 34881|Nampula| |Mozambique|Momade|6|-1|7.0 260 204 40.365001 -22.375016 34887| | |Europa Island|Build v7.1 2008-03-26|6|-1|1515.0 159 205 40.383333 -15.65 34890|Nampula| |Mozambique|Metopa|6|-1|16.0 259 205 40.385567 -22.340493 34894| | |Europa Island|Warren Point|5|-1|901.0 118 205 40.4 -12.9 34898|Cabo Delgado| |Mozambique|Mussange|6|-1|8.0 100 206 40.435261 -11.75314 34909|Cabo Delgado| |Mozambique|Quiterajo|5|-1|5.0 95 206 40.45 -11.433333 34910|Cabo Delgado| |Mozambique|Libambai|6|-1|4.0 92 206 40.45 -11.216667 34911|Cabo Delgado| |Mozambique|Meronvi|6|-1|8.0 91 206 40.463889 -11.164167 34915|Cabo Delgado| |Mozambique|Quissengue|6|-1|28.0 88 206 40.469444 -10.937222 34920|Cabo Delgado| |Mozambique|Bawala|6|-1|107.0 111 206 40.479542 -12.4351 34923|Cabo Delgado| |Mozambique|Quissanga|5|-1|2.0 106 206 40.483333 -12.133333 34925|Cabo Delgado| |Mozambique|Foque|6|-1|2.0 112 207 40.5 -12.533333 34928|Cabo Delgado| |Mozambique|Pangome|6|-1|2.0 157 207 40.516667 -15.516667 34935|Nampula| |Mozambique|Barroa|6|-1|18.0 120 207 40.521999 -13.09009 34939|Cabo Delgado| |Mozambique|Atolo|5|-1|4.0 136 207 40.533333 -14.133333 34942|Nampula| |Mozambique|Muanua|6|-1|120.0 126 207 40.533333 -13.45 34943|Cabo Delgado| |Mozambique|Ombauine|6|-1|99.0 122 207 40.533333 -13.166667 34944|Cabo Delgado| |Mozambique|Morumequina|6|-1|13.0 120 207 40.537251 -13.07446 34947|Cabo Delgado| |Mozambique|Murrebue|5|-1|4.0 104 207 40.538056 -11.998611 34948| | |Mozambique|Pangane|6|-1|10.0 156 207 40.538889 -15.466111 34949|Nampula| |Mozambique|Coluvelane|6|-1|7.0 131 208 40.583333 -13.816667 34962| | |Mozambique|Arire|6|-1|126.0 119 208 40.583333 -12.983333 34963|Cabo Delgado| |Mozambique|Luguni|6|-1|299.0 116 208 40.583333 -12.8 34964|Cabo Delgado| |Mozambique|Tari|6|-1|337.0 109 208 40.585751 -12.33762 34967| | |Mozambique|Ibo|4|-1|20.0 87 208 40.594444 -10.851389 34968|Cabo Delgado| |Mozambique|Maganja|6|-1|4.0 154 208 40.599167 -15.338889 34970|Nampula| |Mozambique|Terrene|6|-1|10.0 112 208 40.6 -12.533333 34971| | |Mozambique|Tavari|6|-1|254.0 133 208 40.616667 -13.95 34977|Nampula| |Mozambique|Macalopa|6|-1|31.0 149 209 40.653839 -15.01684 34984|Nampula| |Mozambique|Lumbo|4|17356|2.0 150 209 40.666667 -15.083333 34986|Nampula| |Mozambique|Mosengeri|6|-1|5.0 140 209 40.666667 -14.366667 34988|Nampula| |Mozambique|Nhiendgi|6|-1|11.0 138 210 40.715759 -14.27763 34996|Nampula| |Mozambique|Chepa|5|-1|21.0 150 210 40.731701 -15.03815 34998| | |Mozambique|Mocambique|2|47615|22.0 149 210 40.75 -14.966667 35002| | |Mozambique|Cabaceira|6|-1|10.0 147 210 40.759998 -14.85538 35003|Nampula| |Mozambique|Matibane|5|-1|8.0 140 211 40.766667 -14.416667 35004|Nampula| |Mozambique|Matiquite|6|-1|7.0 142 211 40.814461 -14.51021 Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. 35008|Nampula| |Mozambique|Minhauine|5|-1|30.0 97 250 43.379059 -11.51552 35171| |Grande Comore|Comoros|Ifoundihe|5|-1|57.0 95 250 43.4 -11.433333 35174| |Grande Comore|Comoros|Chezani|6|-1|153.0 109 254 43.67239 -12.34182 35200| |Moheli|Comoros|Ouallah|5|-1|20.0 109 257 43.852829 -12.36551 35218| |Moheli|Comoros|Iconi|5|-1|69.0 300 261 44.1007 -25.049601 35254|Toliara| |Madagascar|Tanilahy|5|-1|2.0 107 263 44.268768 -12.19934 35274| |Anjouan|Comoros|Sima|5|10272|2.0 301 263 44.298691 -25.141979 35277|Toliara| |Madagascar|Ampalaza|5|-1|23.0 105 266 44.46624 -12.09601 35302| |Anjouan|Comoros|Matsamudu|5|-1|274.0 303 266 44.498539 -25.248039 35309|Toliara| |Madagascar|Bevoalavo Est|5|-1|156.0 107 267 44.50671 -12.20321 35312| |Anjouan|Comoros|Bambao|5|-1|847.0 304 271 44.814789 -25.31131 35326|Toliara| |Madagascar|Befamata|5|-1|8.0 118 277 45.18248 -12.9048 35350| | |Mayotte|Bandele|5|-1|43.0 165 278 45.266667 -16.066667 35354|Mahajanga| |Madagascar|Baly|6|-1|3.0 308 278 45.282921 -25.57295 35356|Toliara| |Madagascar|Ankaratravitra|5|-1|62.0 116 278 45.283333 -12.783333 35357| | |Mayotte|Dzaoudzi|5|13975|70.0 308 282 45.528622 -25.56727 35363|Toliara| |Madagascar|Faux-Cap|5|-1|54.0 164 282 45.55 -16.016667 35364|Mahajanga| |Madagascar|Mahabo|6|-1|2.0 307 283 45.566667 -25.516667 35365|Toliara| |Madagascar|Antavy Atsimo|6|-1|42.0 306 284 45.637169 -25.49004 35369|Toliara| |Madagascar|Ampary|5|-1|15.0 306 285 45.72049 -25.44388 35373|Toliara| |Madagascar|Talaky|5|-1|23.0 305 285 45.758709 -25.39678 35375|Toliara| |Madagascar|Iambaro|5|-1|2.0 304 288 45.900921 -25.308359 35378|Toliara| |Madagascar|Ambazoa|5|-1|207.0 161 288 45.95 -15.816667 35379|Mahajanga| |Madagascar|Andamoty|6|-1|8.0 303 289 45.966667 -25.283333 35380|Toliara| |Madagascar|Ankazomanitsy|6|-1|278.0 303 290 46.06094 -25.267019 35383|Toliara| |Madagascar|Beaniky|5|-1|426.0 302 292 46.183333 -25.2 35387|Toliara| |Madagascar|Ankilihago|6|-1|349.0 301 296 46.443321 -25.13298 35402|Toliara| |Madagascar|Antanandava|5|-1|8.0 302 298 46.601719 -25.17733 35411|Toliara| |Madagascar|Belay|5|-1|43.0 302 299 46.696701 -25.1731 35415|Toliara| |Madagascar|Analapetsa|5|-1|54.0 301 300 46.737011 -25.1401 35418|Toliara| |Madagascar|Mitriaky|5|-1|31.0 301 301 46.8 -25.116667 35420|Toliara| |Madagascar|Amberio|6|-1|45.0 156 303 46.929001 -15.47375 35425|Mahajanga| |Madagascar|Ampasimaleotra|5|-1|2.0 155 304 46.968681 -15.40582 35430|Mahajanga| |Madagascar|Amboaboaka|5|-1|27.0 299 304 46.99004 -25.03233 35432| | |Madagascar|Tolanaro|3|-1|42.0 155 304 47.016667 -15.366667 35434|Mahajanga| |Madagascar|Matahibory|6|-1|27.0 297 306 47.1 -24.883333 35436|Toliara| |Madagascar|Marokoky|6|-1|31.0 294 307 47.192329 -24.66618 35441|Toliara| |Madagascar|Vatomirindry|5|-1|39.0 296 307 47.19593 -24.769991 35442|Toliara| |Madagascar|Sainte-Luce|5|-1|43.0 294 307 47.215031 -24.651119 35443|Toliara| |Madagascar|Ambanihazo|5|-1|39.0 293 307 47.233333 -24.566667 35445|Toliara| |Madagascar|Antsotso Avaratra|6|-1|8.0 292 308 47.273979 -24.50967 35449|Toliara| |Madagascar|Manambato|5|-1|18.0 288 309 47.324581 -24.28686 35455|Toliara| |Madagascar|Manantenina|5|-1|29.0 148 310 47.384159 -14.91924 35460|Mahajanga| |Madagascar|Ambalatsingy|5|-1|10.0 149 310 47.402809 -15.02516 35462|Mahajanga| |Madagascar|Ankinganomby|5|-1|60.0 285 311 47.447392 -24.04088 35465|Fianarantsoa| |Madagascar|Befasy|5|-1|10.0 145 311 47.465698 -14.71215 35466|Mahajanga| |Madagascar|Antetikireja|5|-1|28.0 283 312 47.533333 -23.916667 35474|Fianarantsoa| |Madagascar|Akondro|6|-1|12.0 279 313 47.566667 -23.683333 35479|Fianarantsoa| |Madagascar|Amboananto|6|-1|3.0 278 313 47.579897 -23.597644 35481|Fianarantsoa| |Madagascar|Vodivola|6|-1|9.0 280 313 47.583333 -23.75 35482|Fianarantsoa| |Madagascar|Vohilava|6|-1|5.0 277 313 47.616667 -23.516667 35486|Fianarantsoa| |Madagascar|Bemahala|6|-1|2.0 272 315 47.716667 -23.233333 35502|Fianarantsoa| |Madagascar|Ampataka|6|-1|58.0 271 315 47.733333 -23.15 35507|Fianarantsoa| |Madagascar|Amboboka|6|-1|19.0 269 316 47.783333 -22.966667 35513|Fianarantsoa| |Madagascar|Tsivala|6|-1|14.0 134 316 47.793381 -14.02809 35514|Mahajanga| |Madagascar|Antananabe|5|-1|9.0 268 316 47.816667 -22.916667 35518|Fianarantsoa| |Madagascar|Manambotra|6|-1|30.0 263 317 47.866667 -22.616667 35522|Fianarantsoa| |Madagascar|Loharano|6|-1|2.0 260 318 47.9 -22.383333 35529|Fianarantsoa| |Madagascar|Savana|6|-1|25.0 133 318 47.920849 -13.90573 35534|Antsiranana| |Madagascar|Anorotsangana|5|-1|17.0 258 318 47.95 -22.283333 35537|Fianarantsoa| |Madagascar|Mangatsiatra|6|-1|15.0 257 319 47.966667 -22.216667 35541|Fianarantsoa| |Madagascar|Tataho|6|-1|42.0 256 319 48.015621 -22.146021 35550|Fianarantsoa| |Madagascar|Manakara|3|35311|26.0 127 320 48.049099 -13.54456 35554|Antsiranana| |Madagascar|Ampohana|5|-1|40.0 128 321 48.133333 -13.616667 35565|Antsiranana| |Madagascar|Andranira|6|-1|36.0 252 321 48.15 -21.85 35567|Fianarantsoa| |Madagascar|Itenina|6|-1|118.0 125 323 48.25 -13.4 35578|Antsiranana|Nossi-be|Madagascar|Ampombilava|6|-1|2.0 247 323 48.266667 -21.516667 35580|Fianarantsoa| |Madagascar|Anakitaina|6|-1|310.0 244 324 48.323318 -21.329069 35588|Fianarantsoa| |Madagascar|Ambalavontaka|5|-1|224.0 124 324 48.333333 -13.316667 35589|Antsiranana|Nossi-be|Madagascar|Andrafia|6|-1|8.0 126 324 48.35 -13.483333 35591| |Nosy Komba|Madagascar|Anjiabe|6|-1|2.0 243 324 48.350971 -21.235519 35594|Fianarantsoa| |Madagascar|Mananjary|3|27151|141.0 239 326 48.441231 -20.96954 35603|Fianarantsoa| |Madagascar|Mahela|5|-1|81.0 238 326 48.45 -20.916667 35604|Fianarantsoa| |Madagascar|Andranomahitsy|6|-1|60.0 237 326 48.461479 -20.865101 35605|Fianarantsoa| |Madagascar|Ambohitsara|5|-1|48.0 236 326 48.4762 -20.77265 35608|Fianarantsoa| |Madagascar|Ambahy|5|-1|67.0 234 327 48.5 -20.666667 35611|Fianarantsoa| |Madagascar|Anasindrano|6|-1|80.0 233 327 48.531219 -20.588409 35615|Fianarantsoa| |Madagascar|Nosy-Varika|5|-1|46.0 230 328 48.566667 -20.416667 35620|Fianarantsoa| |Madagascar|Ambinanivolo|6|-1|5.0 229 328 48.575291 -20.35178 35621|Toamasina| |Madagascar|Ambalavontaka|5|-1|17.0 118 328 48.583333 -12.916667 35622| |Nosy Mitsio|Madagascar|Ambaramidada|6|-1|6.0 226 330 48.724805 -20.12854 35629|Toamasina| |Madagascar|Andranotsara|6|-1|40.0 221 331 48.783333 -19.833333 35635|Toamasina| |Madagascar|Androrangambo|6|-1|55.0 223 331 48.80238 -19.903761 35638|Toamasina| |Madagascar|Mahanoro|4|39478|76.0 220 331 48.833333 -19.7 35641|Toamasina| |Madagascar|Ambohidara|6|-1|6.0 110 332 48.85 -12.416667 35650|Antsiranana| |Madagascar|Fararano|6|-1|23.0 218 332 48.866667 -19.6 35657|Toamasina| |Madagascar|Marosiky|6|-1|6.0 111 332 48.870281 -12.46674 35660|Antsiranana| |Madagascar|Antsorokaka|5|-1|2.0 217 332 48.883333 -19.516667 35666|Toamasina| |Madagascar|Seranandavitra|6|-1|30.0 216 333 48.925171 -19.434931 35681|Toamasina| |Madagascar|Maintinandry|5|-1|62.0 213 334 48.983333 -19.266667 35693|Toamasina| |Madagascar|Manakambahiny|6|-1|51.0 211 334 49.01675 -19.162109 35700|Toamasina| |Madagascar|Vohitramposina|5|-1|7.0 211 334 49.033333 -19.1 35702|Toamasina| |Madagascar|Ampitabe|6|-1|7.0 210 335 49.062099 -19.04541 35707|Toamasina| |Madagascar|Amboditafara|5|-1|8.0 209 336 49.1 -18.966667 35713|Toamasina| |Madagascar|Kalomalala|6|-1|55.0 207 336 49.144272 -18.841021 35722|Toamasina| |Madagascar|Ambila-Lemaitso|5|-1|22.0 206 337 49.183333 -18.783333 35728|Toamasina| |Madagascar|Vavony|6|-1|25.0 106 337 49.183333 -12.116667 35729|Antsiranana| |Madagascar|Andohonko|6|-1|12.0 204 337 49.2 -18.7 35731|Toamasina| |Madagascar|Ampanotoamaizina|6|-1|19.0 106 337 49.220341 -12.16288 35738|Antsiranana| |Madagascar|Antsisikala|5|-1|12.0 202 338 49.276669 -18.526449 35752|Toamasina| |Madagascar|Tampina|5|-1|20.0 107 338 49.283333 -12.166667 35754| | |Madagascar|Ambinanililabe|6|-1|30.0 199 339 49.314404 -18.326626 35759|Toamasina| |Madagascar|Marofinaritra|6|-1|24.0 106 339 49.319649 -12.10994 35760|Antsiranana| |Madagascar|Anjiabe|5|-1|2.0 200 339 49.32571 -18.408199 35761|Toamasina| |Madagascar|Ankarefo|5|-1|19.0 198 339 49.33709 -18.254379 35764|Toamasina| |Madagascar|Mahatsara|5|-1|25.0 195 340 49.394131 -18.072161 35770|Toamasina| |Madagascar|Ambodihariha|5|-1|26.0 184 340 49.4 -17.3 35771|Toamasina| |Madagascar|Mahavanona|6|-1|4.0 194 340 49.402111 -18.01371 35772|Toamasina| |Madagascar|Antetezambaro|5|-1|27.0 196 340 49.402309 -18.1499 35773|Toamasina| |Madagascar|Tamatave|3|202400|21.0 193 340 49.4291 -17.959141 35781|Toamasina| |Madagascar|Ambodimanga|5|-1|14.0 192 341 49.444851 -17.893009 35782|Toamasina| |Madagascar|Vohitsara|5|-1|30.0 182 341 49.445221 -17.218679 35783|Toamasina| |Madagascar|Antakobola|5|-1|16.0 191 341 49.45 -17.833333 35784|Toamasina| |Madagascar|Ambinanysahavary|6|-1|36.0 186 341 49.455669 -17.486891 35787|Toamasina| |Madagascar|Mahambo|5|-1|15.0 188 341 49.45937 -17.583731 35789|Toamasina| |Madagascar|Namahoaka|5|-1|11.0 191 341 49.482731 -17.77191 35792|Toamasina| |Madagascar|Taratasy|5|-1|36.0 188 341 49.483333 -17.633333 35793|Toamasina| |Madagascar|Mahatsara|6|-1|11.0 182 341 49.483333 -17.166667 35794| | |Madagascar|Analanampotsy|6|-1|16.0 189 342 49.508881 -17.68404 35796|Toamasina| |Madagascar|Foulpointe|5|-1|35.0 112 342 49.533211 -12.5255 35800|Antsiranana| |Madagascar|Ambaritsatrana|5|-1|2.0 179 342 49.541451 -17.011169 35801|Toamasina| |Madagascar|Manakalana|5|-1|20.0 178 343 49.56815 -16.922871 35806|Toamasina| |Madagascar|Soanierana Ivongo|4|38941|21.0 157 343 49.618198 -15.52182 35815|Toamasina| |Madagascar|Manambia|5|-1|2.0 165 344 49.66597 -16.04781 35824|Toamasina| |Madagascar|Manambolosy|5|-1|5.0 156 344 49.666667 -15.483333 35825|Toamasina| |Madagascar|Anantoraka|6|-1|16.0 177 344 49.668688 -16.863184 35826|Toamasina| |Madagascar|Andrangazaha|5|-1|19.0 161 344 49.672298 -15.78979 35827|Toamasina| |Madagascar|Maintimbato|5|-1|30.0 163 345 49.7 -15.95 35831|Toamasina| |Madagascar|Anoromby|6|-1|56.0 162 345 49.705399 -15.89074 35833|Toamasina| |Madagascar|Fananehana|5|-1|57.0 175 345 49.716572 -16.750311 35836|Toamasina| |Madagascar|Fandrarazana|5|-1|32.0 174 345 49.73595 -16.686899 35839|Toamasina| |Madagascar|Manompana|5|-1|18.0 173 346 49.78968 -16.629129 35845|Toamasina| |Madagascar|Vatobe|5|-1|52.0 169 346 49.816667 -16.3 35853|Toamasina| |Madagascar|Ivontaka|6|-1|3.0 180 346 49.82243 -17.07218 35855|Toamasina|Ile Sainte-marie|Madagascar|Vohilava|5|-1|13.0 171 347 49.837219 -16.441601 35859|Toamasina| |Madagascar|Antanambe|5|-1|39.0 168 347 49.839161 -16.24683 35860|Toamasina| |Madagascar|Seranambe|5|-1|46.0 179 347 49.852589 -16.99824 35861|Toamasina|Ile Sainte-marie|Madagascar|Ambodifototra|5|11687|18.0 178 347 49.862461 -16.92486 35863|Toamasina|Ile Sainte-marie|Madagascar|Lonkintsy|5|-1|2.0 178 347 49.895519 -16.945419 35869|Toamasina|Ile Sainte-marie|Madagascar|Lohatrozona|5|-1|2.0 177 348 49.934212 -16.872009 35876|Toamasina|Ile Sainte-marie|Madagascar|Tanambe|5|-1|13.0 175 349 49.970989 -16.76284 35886|Toamasina|Ile Sainte-marie|Madagascar|Ambodiatafa|5|-1|15.0 125 349 49.972549 -13.42391 35887|Antsiranana| |Madagascar|Ampondra|5|-1|148.0 124 349 49.99876 -13.36155 35889|Antsiranana| |Madagascar|Vohemar|3|-1|126.0 126 349 50.016667 -13.466667 35894|Antsiranana| |Madagascar|Amboanio|6|-1|88.0 163 350 50.062809 -15.90358 35903|Antsiranana| |Madagascar|Rantranavona|5|-1|67.0 134 351 50.108311 -13.98727 35911|Antsiranana| |Madagascar|Tanambao|5|-1|44.0 131 351 50.116667 -13.833333 35913|Antsiranana| |Madagascar|Ambanjsondriry|6|-1|217.0 131 351 50.116667 -13.766667 35914|Antsiranana| |Madagascar|Masondrono|6|-1|217.0 136 351 50.120918 -14.16651 35915|Antsiranana| |Madagascar|Antongompatatra|5|-1|154.0 136 351 50.124439 -14.14164 35916|Antsiranana| |Madagascar|Bemanevika|5|-1|154.0 135 351 50.15 -14.05 35921|Antsiranana| |Madagascar|Ampana Kanana|6|-1|117.0 142 352 50.166667 -14.516667 35927|Antsiranana| |Madagascar|Amborimalana|6|-1|154.0 143 352 50.18021 -14.62134 35929|Antsiranana| |Madagascar|Ambodipont-Sahana|5|-1|146.0 139 352 50.183333 -14.316667 35931|Antsiranana| |Madagascar|Antohamaro|6|-1|246.0 145 352 50.216667 -14.75 35937|Antsiranana| |Madagascar|Ampaha|6|-1|108.0 144 352 50.216667 -14.666667 35938|Antsiranana| |Madagascar|Andrapengy|6|-1|237.0 163 352 50.233333 -15.933333 35942|Antsiranana| |Madagascar|Ambatoharana|6|-1|54.0 147 353 50.25 -14.85 35950|Antsiranana| |Madagascar|Ambinany|6|-1|17.0 162 353 50.267281 -15.87834 35957|Antsiranana| |Madagascar|Vinanivao|5|-1|15.0 147 353 50.277809 -14.89866 35959|Antsiranana| |Madagascar|Antalaha|3|34087|17.0 161 354 50.3153 -15.82091 35967|Antsiranana| |Madagascar|Anaovandrano|5|-1|46.0 149 354 50.316952 -15.00073 35968|Antsiranana| |Madagascar|Antsirabato|5|-1|15.0 160 354 50.333333 -15.733333 35973|Antsiranana| |Madagascar|Anjanozana|6|-1|4.0 159 354 50.349831 -15.6805 35977|Antsiranana| |Madagascar|Ampanavoana|4|-1|10.0 151 355 50.413422 -15.15064 35990|Antsiranana| |Madagascar|Ambalabe|5|-1|4.0 157 355 50.416667 -15.55 35991|Antsiranana| |Madagascar|Antanjokatafana|6|-1|21.0 156 356 50.433689 -15.46305 35996|Antsiranana| |Madagascar|Ratsianarana|5|-1|49.0 155 356 50.441349 -15.42759 35999|Antsiranana| |Madagascar|Ambodivato|5|-1|27.0 153 356 50.446972 -15.25251 36000|Antsiranana| |Madagascar|Ambohitralanana|5|-1|7.0 243 429 55.365528 -21.252541 36345| | |Reunion|Etang Sale|4|-1|253.0 244 431 55.477928 -21.318001 36352| | |Reunion|Saint-Pierre|4|75367|257.0 239 435 55.723942 -21.0289 36367| | |Reunion|Saint-Benoit|4|35194|1304.0 244 436 55.770741 -21.343281 36372| | |Reunion|Saint-Philippe|4|5358|1460.0 241 437 55.834061 -21.150391 36378| | |Reunion|Cascades|5|-1|1870.0 232 462 57.506901 -20.51479 36445| | |Mauritius|Souillac|4|4373|1692.0 230 465 57.70042 -20.406981 36454| | |Mauritius|Maheboug|4|-1|98.0 228 466 57.766667 -20.283333 36460| | |Mauritius|Grande Reviere Sud Est|6|-1|23.0 220 550 63.37207 -19.724661 36596| |Gambrani Island|Mauritius|La Ferme|5|-1|14.0 gauges file created:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/gauges.dat 2022-03-08 00:00:00 2022-03-08 00:00:00 1.0 2022-03-08 00:00:00 ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 writeFolder=2022/GDACS/1000873/1_HWRF restart=False ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/case.dance 2022-03-08 10:02:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:02:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:02:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:02:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:02:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:02:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:03:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:03:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:03:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:03:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 2022-03-08 10:03:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220308.00, forecast of 08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 1 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 1 True (1) numToAdd 289 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 289 (289, 400, 585) (289, 400, 585) created nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 289 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00050.jpg t=08-03-2022 12:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00150.jpg t=09-03-2022 13:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00250.jpg t=10-03-2022 14:30 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-08 00:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif False ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 229 200 / 229 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 00:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.1272222222222222 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 06:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 06:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 06:00:00 2.0 2022-03-08 00:00:00 2022-03-08 06:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/case.dance 2022-03-08 12:02:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:02:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:02:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:02:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:02:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:03:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:03:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:03:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:03:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:03:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:03:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 2022-03-08 12:04:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220308.06, forecast of 08-03-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 2 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 2 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 2 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 08-03-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 313 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00050.jpg t=08-03-2022 12:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00150.jpg t=09-03-2022 13:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00250.jpg t=10-03-2022 14:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-08 06:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 229 200 / 229 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 06:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 06:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.1525 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 12:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 12:00:00 3.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/case.dance 2022-03-08 18:02:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:02:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:02:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:02:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:02:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:03:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:03:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:03:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:03:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:03:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:03:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 2022-03-08 18:04:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220308.12, forecast of 08-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 3 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 3 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 3 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 3 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 08-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 337 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00050.jpg t=08-03-2022 12:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00150.jpg t=09-03-2022 13:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00250.jpg t=10-03-2022 14:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 3 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-08 12:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 229 200 / 229 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 12:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.15722222222222224 end check queue machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 18:00:00 4.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 18:00:00 4.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/case.dance 2022-03-09 01:02:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 01:02:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 01:02:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 01:02:40: sleeping 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/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:00:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:00:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:00:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:01:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:01:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:01:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:01:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:01:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:01:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:03:09: sleeping 10s, waiting completion of 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/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:04:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:04:49: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:04:59: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:05:09: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:05:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:05:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:05:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:05:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:06:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:06:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:06:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:06:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:06:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:06:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:07:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:07:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:07:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:07:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:07:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:07:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:08:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:08:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:08:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:08:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:08:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:08:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:09:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:09:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:09:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:09:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:09:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:09:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:10:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:10:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:10:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:10:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:10:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:10:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:11:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:11:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:11:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:11:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:11:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:11:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:12:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:12:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:12:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:12:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:12:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:12:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:13:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 18:00:00 4.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/V_restart.grd 2022-03-09 03:02:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:02:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:03:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:03:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 03:03:26: sleeping 10s, waiting completion of 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/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:06:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:06:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:06:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:06:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:06:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:06:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:07:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:07:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:07:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:07:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:07:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:07:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:08:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:08:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:08:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:08:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:08:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:08:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:09:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:09:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:09:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:09:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:09:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:09:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:10:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:10:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:10:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:10:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:10:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:10:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:11:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:11:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:11:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:11:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:11:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:11:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:12:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:12:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:12:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:12:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:12:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:12:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:13:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:13:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:13:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:13:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:13:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:13:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:14:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:14:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:14:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:14:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:14:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:14:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:15:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:15:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:15:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:15:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:15:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:15:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:16:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:16:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:16:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:16:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:16:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:16:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:17:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:17:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:17:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:17:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:17:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:17:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:18:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:18:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:18:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:18:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:18:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:18:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:19:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:19:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:19:28: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:19:38: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:19:48: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:19:58: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:20:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 2022-03-09 04:20:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 Input file size is 1957, 1342 0Input file size is 1957, 1342 .Input file size is 585, 400 0...10....20...30....40...50...60...70...80...90...100 - done. 10.machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 18:00:00 4.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220308.18, forecast of 08-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 4 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 4 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 4 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 4 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 4 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 08-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 361 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00050.jpg t=08-03-2022 12:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00150.jpg t=09-03-2022 13:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00250.jpg t=10-03-2022 14:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00350.jpg t=11-03-2022 15:30 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 4 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-08 18:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_ECMWF/namidance/final/completed.txt False 0.5575 at least 1 case already under execution, exiting end check queue ..20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 18:00:00 4.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220308.18, forecast of 08-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 4 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 4 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 4 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 4 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 4 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 08-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 361 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00050.jpg t=08-03-2022 12:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00150.jpg t=09-03-2022 13:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00250.jpg t=10-03-2022 14:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00350.jpg t=11-03-2022 15:30 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 4 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-08 18:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_ECMWF/namidance/final/completed.txt False 0.5583333333333333 at least 1 case already under execution, exiting end check queue Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-08 18:00:00 4.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 4 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 4 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 4 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 4 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 4 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 08-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 361 creating animation with step: 2 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00050.jpg t=08-03-2022 12:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00150.jpg t=09-03-2022 13:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00250.jpg t=10-03-2022 14:30 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00350.jpg t=11-03-2022 15:30 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 4 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-08 18:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-08 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-08 18:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt False 0.4241666666666667 at least 1 case already under execution, exiting end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-09 06:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-09 06:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-09 06:00:00 6.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/case.dance 2022-03-09 12:02:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:02:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:02:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:02:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:02:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:03:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:03:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:03:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:03:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:03:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:03:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:04:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:04:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:04:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 2022-03-09 12:04:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220309.06, forecast of 09-03-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 6 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 6 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 6 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 6 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 6 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 6 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 6 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 09-03-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 409 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 6 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-09 06:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-09 06:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-09 06:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.15361111111111111 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-09 12:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-09 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-09 12:00:00 7.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 2022-03-09 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/case.dance 2022-03-09 18:02:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:02:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:02:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:02:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:03:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:03:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:03:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:03:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:03:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:03:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:04:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 2022-03-09 18:04:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220309.12, forecast of 09-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 7 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 7 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 7 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 7 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 7 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 7 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 7 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/ 6 7 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 09-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 433 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 7 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-09 12:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.12.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-09 12:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-09 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.15583333333333332 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-09 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-09 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-09 18:00:00 8.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 2022-03-09 12:00:00 2022-03-09 18:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/case.dance 2022-03-10 00:09:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:09:53: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:10:03: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:10:13: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:10:23: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:10:33: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:10:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:10:53: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:11:03: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:11:13: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:11:23: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 2022-03-10 00:11:33: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220309.18, forecast of 09-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 8 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 8 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 8 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 8 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 8 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 8 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 8 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/ 6 8 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/ 7 8 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 09-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 457 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 8 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-09 18:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.18.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-09 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-09 18:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.2752777777777778 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 00:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-10 00:00:00 9.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 2022-03-09 12:00:00 2022-03-09 18:00:00 2022-03-10 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/case.dance 2022-03-10 06:02:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:02:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:02:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:02:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:02:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:02:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:03:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:03:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:03:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:03:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:03:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 2022-03-10 06:03:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220310.00, forecast of 10-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 9 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 9 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 9 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 9 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 9 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 9 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 9 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/ 6 9 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/ 7 9 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/ 8 9 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 10-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 481 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 9 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-10 00:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.00.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 00:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.14555555555555555 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 06:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 06:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-10 06:00:00 10.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 2022-03-09 12:00:00 2022-03-09 18:00:00 2022-03-10 00:00:00 2022-03-10 06:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/case.dance 2022-03-10 12:02:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:02:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:02:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:02:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:02:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:03:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:03:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:03:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:03:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:03:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:03:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 2022-03-10 12:04:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220310.06, forecast of 10-03-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 10 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 10 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/ 6 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/ 7 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/ 8 10 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/ 9 10 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 10-03-2022 06:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 505 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00500.jpg t=13-03-2022 05:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 10 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-10 06:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.06.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 06:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 06:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.16083333333333333 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 12:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 12:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-10 12:00:00 11.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 2022-03-09 12:00:00 2022-03-09 18:00:00 2022-03-10 00:00:00 2022-03-10 06:00:00 2022-03-10 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/case.dance 2022-03-10 18:02:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:02:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:02:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:02:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:02:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:03:00: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:03:10: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:03:20: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:03:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:03:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 2022-03-10 18:03:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220310.12, forecast of 10-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 11 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 11 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/ 6 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/ 7 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/ 8 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/ 9 11 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/ 10 11 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 10-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 529 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00500.jpg t=13-03-2022 05:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 11 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-10 12:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.12.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 12:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.15805555555555556 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 18:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-10 18:00:00 12.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 2022-03-09 12:00:00 2022-03-09 18:00:00 2022-03-10 00:00:00 2022-03-10 06:00:00 2022-03-10 12:00:00 2022-03-10 18:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/case.dance 2022-03-11 00:10:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:10:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:10:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:10:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:10:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:11:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:11:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:11:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:11:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:11:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:11:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 2022-03-11 00:12:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220310.18, forecast of 10-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 12 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 12 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/ 6 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/ 7 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/ 8 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/ 9 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/ 10 12 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/ 11 12 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 10-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 553 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00500.jpg t=13-03-2022 05:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-10 18:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.18.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-10 18:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-10 18:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.29944444444444446 end check queue Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['/mnt/output/SSCS/script_nami/execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '6', '-s', 'HWRF', '-o', '2022/GDACS/1000873/1_HWRF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-11 00:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-11 00:00:00 check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance check if folder exists /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid 2022-03-08 00:00:00 2022-03-11 00:00:00 13.0 2022-03-08 00:00:00 2022-03-08 06:00:00 2022-03-08 12:00:00 2022-03-08 18:00:00 2022-03-09 00:00:00 2022-03-09 06:00:00 2022-03-09 12:00:00 2022-03-09 18:00:00 2022-03-10 00:00:00 2022-03-10 06:00:00 2022-03-10 12:00:00 2022-03-10 18:00:00 2022-03-11 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/OUT-T-ETA.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/HA_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/OUT-T-U.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/U_6.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/OUT-T-V.nc -b 25 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/V_6.0h.grd prevnetcf= cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/HA_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/HA_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/U_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/U_restart.grd cp /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/V_6.0h.grd /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/V_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 writeFolder=2022/GDACS/1000873/1_HWRF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000873\1_HWRF /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/case.dance 2022-03-11 06:02:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:02:17: sleeping 10s, waiting completion of 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/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:03:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:03:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:04:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:04:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:04:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:04:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:04:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:04:57: sleeping 10s, waiting completion of 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/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:18:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:18:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:18:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:19:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:19:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:19:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:19:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:19:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:19:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:20:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:20:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:20:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:20:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:20:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 Input file size is 1957, 1342 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 585, 400 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4698P x 3222L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4680P x 3200L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. 2022-03-11 06:20:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:21:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:21:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:21:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:21:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:21:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:21:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:22:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:22:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:22:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:22:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:22:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:22:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:23:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:23:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:23:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:23:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:23:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:23:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:24:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:24:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:24:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:24:33: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:24:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:24:53: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:25:03: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:25:13: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:25:23: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:25:33: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:25:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:25:53: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:26:03: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:26:13: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:26:23: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:26:33: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:26:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:26:54: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:27:04: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:27:14: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:27:24: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:27:34: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:27:44: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:27:54: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:28:04: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:28:14: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:28:24: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:28:34: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:28:44: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:28:54: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:29:04: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:29:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:29:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:29:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:29:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:29:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:30:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:30:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:30:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:30:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:30:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:30:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:31:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:31:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:31:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:31:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:31:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:31:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:32:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:32:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:32:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:32:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:32:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:32:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:33:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:33:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:33:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:33:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:33:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:33:55: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 2022-03-11 06:34:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/P1_MAXHEIGHT_END.jpg geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/20220311.00, forecast of 11-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/locations.xml creating final O:\SSCS/2022/GDACS/1000873/1_HWRF/namidance ndt: 13 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00/ 0 13 False (3) numToAdd 25 26.766666666667 -31.7 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc -31.7 25 (25, 400, 585) (25, 400, 585) created nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06/ 1 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12/ 2 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18/ 3 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00/ 4 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06/ 5 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12/ 6 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18/ 7 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00/ 8 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06/ 9 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12/ 10 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18/ 11 13 False (3) numToAdd 25 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00/ 12 13 True (1) numToAdd 289 26.766666666667 -31.7 False open netCDF file: ...appending nc file update nc ok 6.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc -31.7 1 (1, 400, 585) (1, 400, 585) created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final geoT (26.73333333333367, 0.0666666666666661, 0.0, -5.066666666666666, 0.0, -0.06666666666666667) (400, 585) /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000873/1_HWRF/namidance/final, forecast of 11-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/OUT-T-ETA.nc 577 creating animation with step: 4 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00000.jpg t=08-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00100.jpg t=09-03-2022 01:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00200.jpg t=10-03-2022 02:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00300.jpg t=11-03-2022 03:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00400.jpg t=12-03-2022 04:00 creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/tmp/h_00500.jpg t=13-03-2022 05:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 13 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220308.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220309.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.06 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.12 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220310.18 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/20220311.00 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF 2022-03-08 00:00:00 2022-03-11 00:00:00 6.0 .run_1.2 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220308.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220309.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.00.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.06.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.12.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220310.18.run_1.2.nc /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/netcdf/20220311.00.run_1.2.nc Creating /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc -31.83 1 (1342, 1957) (1, 1342, 1957) created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.679997443762783 -31.839996271439222 65.82999744376278 -4.9899962714392245 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 26.73333333333367 -31.73333333333332 65.73333333333366 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final//ssurge_res_tall.tif done creating coastal impact 26.73333333333367 65.73333333333333 -31.733333333333103 -5.066666666666666 0.0666666666666661 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(26.73333333333367,-31.733333333333103,65.73333333333333,-5.066666666666666), geometry) 100 / 231 200 / 231 rm /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 6 arg= 6 value= -s arg= -s value= HWRF arg= HWRF value= -o arg= -o value= 2022/GDACS/1000873/1_HWRF ** Start date ** 2022-03-08 00:00:00 ** Final date ** 2022-03-11 00:00:00 determined dates from netcdf: 2022-03-08 00:00:00 2022-03-11 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000873/1_HWRF/namidance/final/completed.txt True 0.6841666666666667 end check queue