Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 577, 462 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 577, 462 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. -------------- for Critech users only. This HPC currently has CUDA 7, Intel Composer 2015 and open compilers to load intel compilers run: . /opt/intel/composer_xe_2015.0.090/bin/compilervars.sh intel64 SW installed: SELFE, Delft3d, ECMWF tools, easywave -------------- Creating output file that is 4883P x 3910L. Processing input file /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif. 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing input file /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing input file /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing input file /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif. 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing input file /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing input file /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. 0...10...20...30...40...50...60...70...80...90...100 - done. ('machine=', 'H-Tsunami') ('operLinux', '/mnt/output/SSCS') 3 ('reading ', '/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif') GHSL ('>> 1. resample the tif file to the resolution and proj of pop density ', 0.008333333333333333, ' deg') >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.5347566406 -37.5480404907 109.226423307 -4.96470715736 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output ('>> 6. print / save output in ', '/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/wind_popDensValues.xml') >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge ('reading ', '/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif') GHSL ('>> 1. resample the tif file to the resolution and proj of pop density ', 0.00833333333333333, ' deg') >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.6 -37.4666666667 109.066666667 -5.06666666667 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified ('>> 6. print / save output in ', '/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/ssurge_popDensValues.xml') >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif done Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 577, 462 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000868/1_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000868/1_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.grd existing: determined dates from netcdf: 2022-02-24 12:00:00 2022-03-02 00:00:00 2022-02-24 12:00:00 2022-03-02 00:00:00 12.0 2022-02-24 12:00:00 2022-02-25 00:00:00 2022-02-25 12:00:00 2022-02-26 00:00:00 2022-02-26 12:00:00 2022-02-27 00:00:00 2022-02-27 12:00:00 2022-02-28 00:00:00 2022-02-28 12:00:00 2022-03-01 00:00:00 2022-03-01 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/V_12.0h.grd prevnetcf= ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 writeFolder=2022/GDACS/1000868/1_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt unable to delete O:\SSCS\2022\GDACS\1000868\1_ECMWF /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/case.dance 2022-03-02 12:00:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:00:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:00:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:01:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:01:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:01:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:01:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:01:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:02:03: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:02:14: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:02:24: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:02:35: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:02:45: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:02:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:03:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:03:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:03:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:03:54: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:04:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 2022-03-02 12:04:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/P1_MAXHEIGHT_END.jpg geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/20220301.12, forecast of 01-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] 2022-03-02 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/V_12.0h.grd prevnetcf=/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/20220301.12.tropical_cyclone.nc rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/20220301.12.tropical_cyclone.nc ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 writeFolder=2022/GDACS/1000868/1_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt unable to delete O:\SSCS\2022\GDACS\1000868\1_ECMWF /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/case.dance 2022-03-02 12:05:19: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:05:30: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:05:40: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:05:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:06:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:06:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:06:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:06:33: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:06:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:06:54: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:07:05: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:07:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:07:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:07:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:07:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:07:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:08:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:08:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:08:29: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:08:39: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:08:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:09:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:09:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:09:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:09:32: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:09:43: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:09:53: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:10:04: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:10:15: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:10:25: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:10:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:10:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:10:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:11:08: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 2022-03-02 12:11:18: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/P1_MAXHEIGHT_END.jpg geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/20220302.00, forecast of 02-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] creating final O:\SSCS/2022/GDACS/1000868/1_ECMWF/namidance ndt: 12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12/ 68.633333333333 -37.433333333333 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc -37.433333333333 created nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/ 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc -37.433333333333 created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/final, forecast of 02-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc 817 creating animation with step: 8 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00000.jpg t=24-02-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00200.jpg t=26-02-2022 14:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00400.jpg t=28-02-2022 16:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00600.jpg t=02-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00800.jpg t=04-03-2022 20:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220224.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220302.00.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc -37.540000915527344 created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.53475664059322 -37.54804049069177 109.22642330725988 -4.96470715735843 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.59999999999967 -37.466666666666654 109.06666666666632 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact 68.59999999999967 109.06666666666334 -37.46666666666427 -5.066666666666666 0.06666666666666173 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif False ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(68.59999999999967,-37.46666666666427,109.06666666666334,-5.066666666666666), geometry) rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000868/1_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000868/1_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.grd existing: determined dates from netcdf: 2022-02-24 12:00:00 2022-03-02 12:00:00 2022-02-24 12:00:00 2022-03-02 12:00:00 13.0 2022-02-24 12:00:00 2022-02-25 00:00:00 2022-02-25 12:00:00 2022-02-26 00:00:00 2022-02-26 12:00:00 2022-02-27 00:00:00 2022-02-27 12:00:00 2022-02-28 00:00:00 2022-02-28 12:00:00 2022-03-01 00:00:00 2022-03-01 12:00:00 2022-03-02 00:00:00 2022-03-02 12:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/V_12.0h.grd prevnetcf= shutil.copyfile(/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/HA_12.0h.grd,/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/HA_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 writeFolder=2022/GDACS/1000868/1_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000868\1_ECMWF /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/case.dance 2022-03-03 01:00:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:00:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:00:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:01:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:01:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:01:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:01:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:01:46: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:01:56: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:02:06: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:02:16: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:02:26: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:02:36: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:02:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:02:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:03:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:03:17: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:03:27: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:03:37: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:03:47: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:03:57: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 2022-03-03 01:04:07: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/P1_MAXHEIGHT_END.jpg geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/20220302.12, forecast of 02-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] creating final O:\SSCS/2022/GDACS/1000868/1_ECMWF/namidance ndt: 13 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12/ 0 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc -37.433333333333 49 created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00/ 1 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12/ 2 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00/ 3 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12/ 4 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00/ 5 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12/ 6 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00/ 7 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12/ 8 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/ 9 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/ 10 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/ 11 13 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/ 12 13 True (1) numToAdd 289 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc -37.433333333333 1 created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/final, forecast of 02-03-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc 865 creating animation with step: 8 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00000.jpg t=24-02-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00200.jpg t=26-02-2022 14:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00400.jpg t=28-02-2022 16:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00600.jpg t=02-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00800.jpg t=04-03-2022 20:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 13 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220224.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220302.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220302.12.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc -37.540000915527344 1 error in maxvel operands could not be broadcast together with remapped shapes [original->remapped]: (12,462,577) and requested shape (1,462,577) creating classify files reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.53475664059322 -37.54804049069177 109.22642330725988 -4.96470715735843 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.59999999999967 -37.466666666666654 109.06666666666632 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact 68.59999999999967 109.06666666666334 -37.46666666666427 -5.066666666666666 0.06666666666666173 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(68.59999999999967,-37.46666666666427,109.06666666666334,-5.066666666666666), geometry) rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000868/1_ECMWF determined dates from netcdf: 2022-02-24 12:00:00 2022-03-02 12:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt True 0.24138888888888888 submitting a new case python execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000868/1_GFS>>/mnt/output/SSCS/2022/GDACS/1000868/1_GFS/namidance/logexec.txt & end check queue Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 577, 462 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000868/1_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000868/1_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-02-24 12:00:00 ** Final date ** 2022-03-03 00:00:00 determined dates from netcdf: 2022-02-24 12:00:00 2022-03-03 00:00:00 2022-02-24 12:00:00 2022-03-03 00:00:00 14.0 2022-02-24 12:00:00 2022-02-25 00:00:00 2022-02-25 12:00:00 2022-02-26 00:00:00 2022-02-26 12:00:00 2022-02-27 00:00:00 2022-02-27 12:00:00 2022-02-28 00:00:00 2022-02-28 12:00:00 2022-03-01 00:00:00 2022-03-01 12:00:00 2022-03-02 00:00:00 2022-03-02 12:00:00 2022-03-03 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/V_12.0h.grd prevnetcf= shutil.copyfile(/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/HA_12.0h.grd,/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/HA_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 writeFolder=2022/GDACS/1000868/1_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000868\1_ECMWF /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/case.dance 2022-03-03 12:00:50: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:01:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:01:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:01:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:01:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:01:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:01:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:02:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:02:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:02:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:02:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:02:42: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:02:52: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:03:02: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:03:12: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 2022-03-03 12:03:22: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/P1_MAXHEIGHT_END.jpg geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/20220303.00, forecast of 03-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/P1_MAXHEIGHT_END.png creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/locations.xml creating final O:\SSCS/2022/GDACS/1000868/1_ECMWF/namidance ndt: 14 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12/ 0 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc -37.433333333333 49 created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00/ 1 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12/ 2 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00/ 3 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12/ 4 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00/ 5 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12/ 6 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00/ 7 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12/ 8 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/ 9 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/ 10 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/ 11 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/ 12 14 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/ 13 14 True (1) numToAdd 289 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc -37.433333333333 1 created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/final, forecast of 03-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.png opening /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc 913 creating animation with step: 8 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00000.jpg t=24-02-2022 12:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00200.jpg t=26-02-2022 14:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00400.jpg t=28-02-2022 16:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00600.jpg t=02-03-2022 18:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00800.jpg t=04-03-2022 20:00 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 14 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF 2022-02-24 12:00:00 2022-03-03 00:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220224.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220302.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220302.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220303.00.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc -37.540000915527344 1 created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.53475664059322 -37.54804049069177 109.22642330725988 -4.96470715735843 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.59999999999967 -37.466666666666654 109.06666666666632 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact 68.59999999999967 109.06666666666334 -37.46666666666427 -5.066666666666666 0.06666666666666173 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(68.59999999999967,-37.46666666666427,109.06666666666334,-5.066666666666666), geometry) rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000868/1_ECMWF ** Start date ** 2022-02-24 12:00:00 ** Final date ** 2022-03-03 00:00:00 determined dates from netcdf: 2022-02-24 12:00:00 2022-03-03 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt True 0.23916666666666667 submitting a new case python execNami.py exec /mnt/output/SSCS/script_nami/runCase.sh -dh 6 -s GFS -o 2022/GDACS/1000868/1_GFS>>/mnt/output/SSCS/2022/GDACS/1000868/1_GFS/namidance/logexec.txt & end check queue Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. machine= HV-Covid operLinux /mnt/output/SSCS ['execNami.py', 'exec', '/mnt/output/SSCS/script_nami/runCase.sh', '-dh', '12', '-s', 'ECMWF', '-o', '2022/GDACS/1000868/1_ECMWF'] 12 arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000868/1_ECMWF Bathymetry file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.grd existing: ** Start date ** 2022-02-24 12:00:00 ** Final date ** 2022-03-04 00:00:00 determined dates from netcdf: 2022-02-24 12:00:00 2022-03-04 00:00:00 2022-02-24 12:00:00 2022-03-04 00:00:00 16.0 2022-02-24 12:00:00 2022-02-25 00:00:00 2022-02-25 12:00:00 2022-02-26 00:00:00 2022-02-26 12:00:00 2022-02-27 00:00:00 2022-02-27 12:00:00 2022-02-28 00:00:00 2022-02-28 12:00:00 2022-03-01 00:00:00 2022-03-01 12:00:00 2022-03-02 00:00:00 2022-03-02 12:00:00 2022-03-03 00:00:00 2022-03-03 12:00:00 2022-03-04 00:00:00 \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/OUT-T-ETA.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/HA_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/OUT-T-U.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/U_12.0h.grd \gdal_translate -of GSAG -ot Float64 NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/OUT-T-V.nc -b 49 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/V_12.0h.grd prevnetcf= shutil.copyfile(/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/HA_12.0h.grd,/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/HA_restart.grd ********************** caseFolder=/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 writeFolder=2022/GDACS/1000868/1_ECMWF restart=True ********************** deleting /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt O:\SSCS\2022\GDACS\1000868\1_ECMWF /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/case.dance 2022-03-04 10:00:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:00:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:01:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:01:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:01:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:01:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:01:41: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:01:51: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:02:01: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:02:11: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:02:21: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 2022-03-04 10:02:31: sleeping 10s, waiting completion of /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/P1_MAXHEIGHT_END.jpg geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/20220304.00, forecast of 04-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/P1_MAXHEIGHT_END.png 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/locations.xml ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] writing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/locations.xml creating final O:\SSCS/2022/GDACS/1000868/1_ECMWF/namidance ndt: 16 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12/ 0 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 True open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc -37.433333333333 49 created nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00/ 1 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12/ 2 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00/ 3 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12/ 4 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00/ 5 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12/ 6 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00/ 7 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12/ 8 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00/ 9 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12/ 10 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00/ 11 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12/ 12 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00/ 13 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12/ 14 16 False (3) numToAdd 49 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 folder,it,ndt,it==ndt-1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00/ 15 16 True (1) numToAdd 289 68.633333333333 -37.433333333333 False open netCDF file: ...appending nc file update nc ok 12.0 open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc -37.433333333333 1 created nc ok creating imagess for final folder /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final geoT (68.59999999999967, 0.06666666666666173, 0.0, -5.066666666666666, 0.0, -0.06666666666666599) (486, 607) /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-EXTREMUM.nc Maximum height 2022/GDACS/1000868/1_ECMWF/namidance/final, forecast of 04-03-2022 00:00 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/base.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.jpg creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/P1_MAXHEIGHT_END.png 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 opening /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/OUT-T-ETA.nc 1009 creating animation with step: 8 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00000.jpg t=24-02-2022 12:00 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00200.jpg t=26-02-2022 14:00 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00400.jpg t=28-02-2022 16:00 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 Input file size is 577, 462 0...10...20...30...40...50...60...70...80...90...100 - done. Input file size is 607, 486 0...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif [1/1] : 0Using internal nodata values (e.g. -200) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4883P x 3910L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif [1/1] : 0Using internal nodata values (e.g. 9.96921e+36) for image /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif. Copying nodata values from source /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif [1/1] : 0Using internal nodata values (e.g. -3.40282e+38) for image /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. Creating output file that is 4856P x 3888L. Processing /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif [1/1] : 0Using internal nodata values (e.g. 65535) for image /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif. Copying nodata values from source /mnt/output/GDACS/DATA/GHSL/countries/ghs30ss_cnt.tif to destination /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif. ...10...20...30...40...50...60...70...80...90...100 - done. 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00600.jpg t=02-03-2022 18:00 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_00800.jpg t=04-03-2022 20:00 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/tmp/h_01000.jpg t=06-03-2022 22:00 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 68.633333333333 109.03333333333 -37.433333333333 -5.100000000000001 68.633333333333 109.03333333333 ['id', '$admin', '$island', '$country', 'cityclass', 'popest', 'long', 'lat', '$name'] ndt: 16 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220224.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220225.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220226.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220227.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220228.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220301.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220302.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220303.12 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/20220304.00 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF 2022-02-24 12:00:00 2022-03-04 00:00:00 12.0 .tropical_cyclone /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220224.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220225.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220226.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220227.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220228.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220301.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220302.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220302.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220303.00.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220303.12.tropical_cyclone.nc /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/netcdf/20220304.00.tropical_cyclone.nc Creating /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc open netCDF file: ...creating nc file: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc -37.540000915527344 1 created nc ok gdal_translate -of GTiff NETCDF:/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.nc:maxvel -b 1 /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif creating classify files reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXVEL_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.008333333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.53475664059322 -37.54804049069177 109.22642330725988 -4.96470715735843 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 5. count the popolation in each cell and assign to the class and write to output >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/wind_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//wind10m_res_tall.tif done input var: storm surge reading /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/TIF_MAXHEIGHT_END.tif GHSL >> 1. resample the tif file to the resolution and proj of pop density 0.00833333333333333 deg >> 2. read the charactristics of the input file >> 3a. extract a piece of pop. file corresponding to the required bounding box gdalwarp -te 68.59999999999967 -37.466666666666654 109.06666666666632 -5.066666666666668 "/mnt/output/GDACS/DATA/GHSL/GHS_POP_E2015_GLOBE_R2019A_4326_30ss_V1_0_hmax5m_2km.tif" "/mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif" >> 3b. extract a piece of countries corresponding to the required bounding box and resolution/proj of pop density >> 4. classify + coeff the raster file creating another array of values classified >> 6. print / save output in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/ssurge_popDensValues.xml >> 7. remove files rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_popfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_countryfile_tall_clipped.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final//ssurge_res_tall.tif done creating coastal impact 68.59999999999967 109.06666666666334 -37.46666666666427 -5.066666666666666 0.06666666666666173 bathymetry.tif in grid: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif True ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/bathymetry.tif in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif ...copying /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/grid/iDeck.txt in /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt ... file already existing, not copied sshpass -p ipsc ssh critechuser@139.191.244.72 /home/critechuser/operational/bin/coastalImpact -i /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/iDeck.txt -o /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final > /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt SELECT id, SHAPE_LENG,AsText(Geometry) FROM shoreline WHERE MBRContains(BuildMBR(68.59999999999967,-37.46666666666427,109.06666666666334,-5.066666666666666), geometry) rm /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/bathymetry.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/clipFileCI.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastPlaces.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/end-of-stuff.txt /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalIndex.tif /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpactMax.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/coastalImpact.bmp.aux.xml /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/outCostalImpact.txt (4a) creating completed: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt arg= exec value= /mnt/output/SSCS/script_nami/runCase.sh arg= /mnt/output/SSCS/script_nami/runCase.sh value= -dh arg= -dh value= 12 arg= 12 value= -s arg= -s value= ECMWF arg= ECMWF value= -o arg= -o value= 2022/GDACS/1000868/1_ECMWF ** Start date ** 2022-02-24 12:00:00 ** Final date ** 2022-03-04 00:00:00 determined dates from netcdf: 2022-02-24 12:00:00 2022-03-04 00:00:00 no case needed, exiting checking existance of: /mnt/output/SSCS/2022/GDACS/1000868/1_ECMWF/namidance/final/completed.txt True 0.20833333333333334 end check queue